RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TNFRSF12AQ9NP84 129 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 KCNK9Q9NPC2 374 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 ZNF71Q9NQZ8 489 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 PRTFDC1Q9NRG1 225 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 LYARQ9NX58 379 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 VPS29Q9UBQ0 182 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 PHF11Q9UIL8 331 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 FBXW2Q9UKT8 454 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 TCRBV16S1A1N1A0A5B0 115 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 EIF4E1BA6NMX2 242 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 TMPRSS11DO60235 418 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CTNSO60931 367 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CRCPO75575 148 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 SERPINA7P05543 415 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CPN2P22792 545 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 OR4D2P58180 307 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 ACTN3Q08043 901 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 GALNT1Q10472 559 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 TBL3Q12788 808 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 SLC13A2Q13183 592 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 IRAK1BP1Q5VVH5 260 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CYP20A1Q6UW02 462 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 RIPOR1Q6ZS17 1223 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 NUDT9Q9BW91 350 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 ACPTQ9BZG2 426 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 SHCBP1LQ9BZQ2 653 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 LHPPQ9H008 270 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 NECTIN3Q9NQS3 549 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 TP53TG5Q9Y2B4 290 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 ATG4BQ9Y4P1 393 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 PCDHGB7Q9Y5F8 929 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CLDN16Q9Y5I7 305 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 NUP210LQ5VU65 1888 aa18.63■□□□□ 0.57
PDLIM2-207ENST00000409417 CNTRLQ7Z7A1 2325 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SERTM1A2A2V5 107 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 K7EM74 188 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 BIRC5O15392 142 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SEC24DO94855 1032 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 ALPPP05187 535 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 KLK1P06870 262 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 FAM58BPP0C7Q3 252 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 PRR35P0CG20 571 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 DHRS4L1P0CG22 281 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 UROSP10746 265 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 TLX1P31314 330 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SERPINB5P36952 375 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 HTR6P50406 440 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 HNRNPH2P55795 449 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 AP2B1P63010 937 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 RAPSNQ13702 412 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 ARL13AQ5H913 290 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 VWA5B1Q5TIE3 1220 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 ASB18Q6ZVZ8 466 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 COMMD6Q7Z4G1 85 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 CUZD1Q86UP6 607 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 NUDCD3Q8IVD9 361 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 EFCAB3Q8N7B9 438 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 OR6Y1Q8NGX8 325 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 THOC3Q96J01 351 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 LPAR4Q99677 370 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SMAD5Q99717 465 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 ASB4Q9Y574 426 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SCN2AQ99250 2005 aa18.62■□□□□ 0.57
PDLIM2-207ENST00000409417 SYNDIG1LA6NDD5 238 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 PROM1O43490 865 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 GBAP04062 536 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 PDGFAP04085 211 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 CHN1P15882 459 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 TPP2P29144 1249 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 BUD31P41223 144 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 MAGOHP61326 146 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 EXT1Q16394 746 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 PLAG1Q6DJT9 500 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 PAPD4Q6PIY7 484 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 ZCCHC23Q6ZST2 131 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 HDXQ7Z353 690 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 CHTF18Q8WVB6 975 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 TLCD1Q96CP7 247 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 ZNF552Q9H707 407 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 EML4Q9HC35 981 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 ZNF451Q9Y4E5 1061 aa18.61■□□□□ 0.57
PDLIM2-207ENST00000409417 A0A1W2PR48 441 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 ARHGAP10A1A4S6 786 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 TGFBR3LH3BV60 316 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 AZIN1O14977 448 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 PRB1P04280 392 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 CHRNGP07510 517 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 SERPINB3P29508 390 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 TNFRSF17Q02223 184 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 CCNYL2Q5T2Q4 361 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 AGAP7PQ5VUJ5 663 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 TRIM46Q7Z4K8 759 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 CLNKQ7Z7G1 428 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 HOMEZQ8IX15 550 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 TANKQ92844 425 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 AGAP4Q96P64 663 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 RPF2Q9H7B2 306 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 C5AR2Q9P296 337 aa18.6■□□□□ 0.57
PDLIM2-207ENST00000409417 DOCK10Q96BY6 2186 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms