RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 WASP42768 502 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 LY6G5CQ5SRR4 150 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 DPP10Q8N608 796 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 AQP11Q8NBQ7 271 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CHST14Q8NCH0 376 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 TSPEARQ8WU66 669 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 NACC2Q96BF6 587 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 APIPQ96GX9 242 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 TOX2Q96NM4 488 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 SDHCQ99643 169 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ASB8Q9H765 288 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 TVP23BQ9NYZ1 205 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CRLS1Q9UJA2 301 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 FZD4Q9ULV1 537 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 OR10H3O60404 316 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PDYNP01213 254 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 FGF1P05230 155 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CA3P07451 260 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CD72P21854 359 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 HLA-FP30511 346 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 KIR2DL3P43628 341 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 AVPR1BP47901 424 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 BCL2L15Q5TBC7 163 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CHPFQ8IZ52 775 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ZNF382Q96SR6 550 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CLN6Q9NWW5 311 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 KCNN3Q9UGI6 736 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PSORS1C1Q9UIG5 152 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 NDRG4Q9ULP0 352 aaKnown RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 B4DXG7 233 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PCDH17O14917 1159 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PEPDP12955 493 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 DDOSTP39656 456 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 RGS4P49798 205 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 MESP2Q0VG99 397 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CBLBQ13191 982 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 VMACQ2NL98 169 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CDONQ4KMG0 1287 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 TPGS2Q68CL5 300 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CAPN13Q6MZZ7 669 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CD200R1Q8TD46 325 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ZNF431Q8TF32 576 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 OTUB1Q96FW1 271 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 FERD3LQ96RJ6 166 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PDFQ9HBH1 243 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 RDH8Q9NYR8 311 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CCNB2O95067 398 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 RHOP08100 348 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 HLA-EP13747 358 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 OLR1P78380 273 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 LCN1P1Q5VSP4 162 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 AFTPHQ6ULP2 937 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TCEANCQ8N8B7 351 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 FCGR1BQ92637 280 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 ZNF689Q96CS4 500 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-202ENST00000409251 EID2BQ96D98 161 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 EIF3KQ9UBQ5 218 aaKnown RBP12.4□□□□□ -0.42
PTPRN-202ENST00000409251 MGAT4AQ9UM21 535 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 LOC285095A0A1B0GVY8 99 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 WASH4PA8MWX3 477 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 WASH3PC4AMC7 463 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 FABP7O15540 132 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 ITGAMP11215 1152 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-202ENST00000409251 HKDC1Q2TB90 917 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TCEAL5Q5H9L2 206 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 IRAK1BP1Q5VVH5 260 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 VWA5B2Q8N398 1253 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 ASZ1Q8WWH4 475 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 PLD4Q96BZ4 506 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 FAM126AQ9BYI3 521 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TPT1P8Q9HAU6 139 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 TMCC3Q9ULS5 477 aa12.4□□□□□ -0.42
PTPRN-202ENST00000409251 CCDC88CQ9P219 2028 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 SCAMP1O15126 338 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 POLR1CO15160 346 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CACNG3O60359 315 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 PRAMEF1O95521 474 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 RAB14P61106 215 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 C1DQ13901 141 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 KEAP1Q14145 624 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 GPR19Q15760 415 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 IL20RBQ6UXL0 311 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 DEF8Q6ZN54 512 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms