RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CR2P20023 1033 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 SDC2P34741 201 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 EIF2DP41214 584 aaKnown RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 RGS6P49758 472 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 SUOXP51687 545 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 UGT2B15P54855 530 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 BAK1Q16611 211 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 FNDC3BQ53EP0 1204 aaKnown RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 ATAD3CQ5T2N8 411 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 IDNKQ5T6J7 187 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 C22orf39Q6P5X5 142 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 CHPFQ8IZ52 775 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 C12orf76Q8N812 135 aaPredicted RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 ZNF557Q8N988 423 aaPredicted RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 CMTM7Q96FZ5 175 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 DOHHQ9BU89 302 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 YTHDF1Q9BYJ9 559 aaKnown RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 EGLN3Q9H6Z9 239 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 SMURF1Q9HCE7 757 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 ZCCHC3Q9NUD5 404 aaKnown RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 PTGFRNQ9P2B2 879 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 GTF2A1LQ9UNN4 478 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 PCDHB11Q9Y5F2 797 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 HCFC2Q9Y5Z7 792 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 A0A1W2PQ45 241 aaPredicted RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 A0A1W2PQL4 384 aaPredicted RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 A0A1W2PQY0 241 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CLCA1A8K7I4 914 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 WASH4PA8MWX3 477 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ISM1B1AKI9 464 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 SYN3O14994 580 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CYP17A1P05093 508 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CBLP22681 906 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CPN2P22792 545 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 DNAJB1P25685 340 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 SOX18P35713 384 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 GPR4P46093 362 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 C1DQ13901 141 aaKnown RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 NCF4Q15080 339 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 TCTN1Q2MV58 587 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 MED27Q6P2C8 311 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 TPRG1Q6ZUI0 275 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 TMEFF1Q8IYR6 380 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ATP6V1C2Q8NEY4 427 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 OR5AR1Q8NGP9 310 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CSGALNACT1Q8TDX6 532 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ZNF300Q96RE9 604 aaPredicted RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 HTATIP2Q9BUP3 242 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 RBCK1Q9BYM8 510 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 MED20Q9H944 212 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 NDUFAF4Q9P032 175 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 KCNK6Q9Y257 313 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 RUVBL1Q9Y265 456 aaKnown RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 CHD5Q8TDI0 1954 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ANKRD36A6QL64 1941 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 MED12Q93074 2177 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 OR2A25A4D2G3 310 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 SAGE2PA6NJ88 616 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ANHXE9PGG2 379 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 H3BNC9 293 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 AKR7A2O43488 359 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 GPX5O75715 221 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 POLR2EP19388 210 aaKnown RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 TGM1P22735 817 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CSTF2P33240 577 aaKnown RBP eCLIP7.96□□□□□ -1.14
SNX13-201ENST00000409076 HTR7P34969 479 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 SSR2P43308 183 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 ST8SIA6P61647 398 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 PCDH1Q08174 1060 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 MGAT3Q09327 533 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 LRRC26Q2I0M4 334 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 SLC30A6Q6NXT4 461 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 PLET1Q6UQ28 207 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 PRSS48Q7RTY5 328 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 SYT9Q86SS6 491 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 NPAS4Q8IUM7 802 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 OR8H1Q8NGG4 311 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 APH1BQ8WW43 257 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 RAD51AP1Q96B01 352 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 DUS3LQ96G46 650 aaKnown RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 LRR1Q96L50 414 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 WFDC6Q9BQY6 131 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CDADC1Q9BWV3 514 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CCNB1IP1Q9NPC3 277 aa7.96□□□□□ -1.14
SNX13-201ENST00000409076 CUEDC1Q9NWM3 386 aaPredicted RBP7.96□□□□□ -1.14
SNX13-201ENST00000409076 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 DSCR3O14972 297 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 KMOO15229 486 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 ARHGEF9O43307 516 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 UGT2B17O75795 530 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 WISP3O95389 354 aaPredicted RBP7.95□□□□□ -1.14
SNX13-201ENST00000409076 C8AP07357 584 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 C1SP09871 688 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 APEHP13798 732 aaKnown RBP7.95□□□□□ -1.14
SNX13-201ENST00000409076 FUT1P19526 365 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 CHMP24386 653 aa7.95□□□□□ -1.14
SNX13-201ENST00000409076 HTR2BP41595 481 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms