RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ADAP00813 363 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 IFNA1P01562 189 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 STSP08842 583 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PMS2P3Q13401 168 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 AADACL4Q5VUY2 407 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 CDHR3Q6ZTQ4 885 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 HFE2Q6ZVN8 426 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 DCAF4L2Q8NA75 395 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 OR56A3Q8NH54 315 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PEBP4Q96S96 227 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 RAD9AQ99638 391 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 MYOCOSA0A1B0GUC4 107 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ABRAXAS2Q15018 415 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 EIF4HQ15056 248 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 PMEPA1Q969W9 287 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ZNF486Q96H40 463 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 GIMAP2Q9UG22 337 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ARVCFO00192 962 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 TNFRSF10BO14763 440 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 SLC35E2BP0CK96 405 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 SMPD1P17405 629 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 BMXP51813 675 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 LASP1Q14847 261 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ACBD7Q8N6N7 88 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 OR51B5Q9H339 312 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 UPK3BL1B0FP48 263 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 UPK3BL2E5RIL1 263 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 NARSO43776 548 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 MMP20O60882 483 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 DNAJB6O75190 326 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 UPK1BO75841 260 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 CKMT1AP12532 417 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 ACVRL1P37023 503 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 NFE2L1Q14494 772 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PROX2Q3B8N5 592 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 SLC29A4Q7RTT9 530 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 WDR53Q7Z5U6 358 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 VRTNQ9H8Y1 702 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 MRC1P22897 1456 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 PAHP00439 452 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ERCC1P07992 297 aaPredicted RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 CAPN3P20807 821 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 GDI2P50395 445 aaKnown RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 PRKXP51817 358 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 GRB7Q14451 532 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 MS4A13Q5J8X5 152 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 TOR1AIP2Q8NFQ8 470 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 TXLNGYQ9BZA5 131 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 SOX17Q9H6I2 414 aaPredicted RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 GPN2Q9H9Y4 310 aaPredicted RBP12.47□□□□□ -0.41
RNF43-201ENST00000407977 B8ZZF3 427 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 SOCS5O75159 536 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 CLDN7O95471 211 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 GP1BBP13224 206 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 PHB2Q99623 299 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 OR10A4Q9H209 315 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ERVK13-1Q9NX77 482 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 NDUFAF4Q9P032 175 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 RHCGQ9UBD6 479 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 CLDN8P56748 225 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 GPRC6AQ5T6X5 926 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 SMIM30A4D0T7 59 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 H3BMQ9 156 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 OAZ2O95190 189 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 RETP07949 1114 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ACP5P13686 325 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 TIA1P31483 386 aaKnown RBP eCLIP12.47□□□□□ -0.411e-7■■■■□ 21.9
RNF43-201ENST00000407977 ACTR1BP42025 376 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 BDKRB1P46663 353 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 OR1E2P47887 323 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 ACTR1AP61163 376 aa12.47□□□□□ -0.41
RNF43-201ENST00000407977 PIGFQ07326 219 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms