RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 MRPL15Q9P015 296 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 MGAT4CQ9UBM8 478 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ZNF69Q9UC07 566 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 COL11A1P12107 1806 aaPredicted RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 A0A1B0GVI7 797 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 POM121BA6NF01 834 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 KERAO60938 352 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SDC3O75056 442 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 CHMP24386 653 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ACVR2AP27037 513 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 HOXA9P31269 272 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 HSPA7P48741 367 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 GPR176Q14439 515 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 USF2Q15853 346 aaPredicted RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 PAN2Q504Q3 1202 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SAMD12Q8N8I0 201 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ADAMTS14Q8WXS8 1223 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 MRGPRX2Q96LB1 330 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 CCDC115Q96NT0 180 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 CMSS1Q9BQ75 279 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SLC19A3Q9BZV2 496 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 TMEM138Q9NPI0 162 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 GTPBP1O00178 669 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ACKR2O00590 384 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 FPGTO14772 594 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 AKAP8O43823 692 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 MPC2O95563 127 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 VTNP04004 478 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 H2AFB2P0C5Z0 115 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ARSDP51689 593 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 AKR1C2P52895 323 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 AP1S2P56377 157 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 AKR1C1Q04828 323 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ABRAXAS2Q15018 415 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SSX1Q16384 188 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SLC25A25Q6KCM7 469 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 AQP11Q8NBQ7 271 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SORCS2Q96PQ0 1159 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 SLC38A3Q99624 504 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 COPS8Q99627 209 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 NFKBIZQ9BYH8 718 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 TFB2MQ9H5Q4 396 aaKnown RBP13.45□□□□□ -0.26
DUSP28-202ENST00000405954 PCDHGB7Q9Y5F8 929 aa13.45□□□□□ -0.26
DUSP28-202ENST00000405954 PPEF2O14830 753 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SIGLEC6O43699 453 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 MSCO60682 206 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ADAM11O75078 769 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 RPL17P18621 184 aaKnown RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 XPAP23025 273 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PREPP48147 710 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ARFIP1P53367 373 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 BACE1P56817 501 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ATG9BQ674R7 924 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 GDPGP1Q6ZNW5 385 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 BTN2A1Q7KYR7 527 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PAQR7Q86WK9 346 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 THAP6Q8TBB0 222 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SLC25A46Q96AG3 418 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 WDR77Q9BQA1 342 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 BRINP2Q9C0B6 783 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SCP2D1Q9UJQ7 156 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 COL1A2P08123 1366 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 C2orf81A6NN90 581 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 FAM220BPB1ANY3 271 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ENTPD6O75354 484 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 OTCP00480 354 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PCSK2P16519 638 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PTPN6P29350 595 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 KCNJ3P48549 501 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 MAPKAPK2P49137 400 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PRAMEF13Q5VWM6 474 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SFRP4Q6FHJ7 346 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SSX9Q7RTT3 188 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 KIAA0907Q7Z7F0 614 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SELENOMQ8WWX9 145 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ULBP1Q9BZM6 244 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 GTF2IRD1Q9UHL9 959 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 IQCMA0A1B0GVH7 501 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 TLR4O00206 839 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 ARNTLO00327 626 aa13.44□□□□□ -0.26
DUSP28-202ENST00000405954 SEPT4O43236 478 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms