RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF720Q7Z2F6 126 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 GLRX5Q86SX6 157 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 RPAINQ86UA6 219 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF329Q86UD4 541 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 PIGZQ86VD9 579 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 METTL23Q86XA0 190 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 MYOCDQ8IZQ8 938 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 KIAA0895Q8NCT3 520 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TET1Q8NFU7 2136 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRIM58Q8NG06 486 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR4C3Q8NH37 302 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 KCNE4Q8WWG9 221 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPATA17Q96L03 361 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 IFT74Q96LB3 600 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPAG5Q96R06 1193 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 INTS14Q96SY0 518 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 EGFL8Q99944 293 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 NFKBIZQ9BYH8 718 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TXNDC16Q9P2K2 825 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CGNQ9P2M7 1197 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 RWDD2AQ9UIY3 292 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 POMT1Q9Y6A1 747 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TDRD15B5MCY1 1934 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CNTNAP2Q9UHC6 1331 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ALPK3Q96L96 1907 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRR23AA6NEV1 266 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 C2orf81A6NN90 581 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM72CH0Y354 149 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCL24O00175 119 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 PDXKO00764 312 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 GRID2O43424 1007 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRMUO75648 421 aaKnown RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FGFR1OPO95684 399 aaKnown RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM58BPP0C7Q3 252 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 SMIM10L2AP0DMW4 78 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 SMIM10L2BP0DMW5 78 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCL5P13501 91 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CA6P23280 308 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 GLRA2P23416 452 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 LBX1P52954 281 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 ACLYP53396 1101 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 MAZP56270 477 aaKnown RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 PEX3P56589 373 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CLDN15P56746 228 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CDR2Q01850 454 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 MYL5Q02045 173 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 RASGEF1BQ0VAM2 473 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TFDP1Q14186 410 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TAF13Q15543 124 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 KNOP1Q1ED39 458 aaKnown RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 GTDC1Q4AE62 458 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZCWPW2Q504Y3 356 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 MARCH8Q5T0T0 291 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 MPP7Q5T2T1 576 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM72AQ5TYM5 149 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM72DQ6L9T8 149 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 ENPP7Q6UWV6 458 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 CXCL17Q6UXB2 119 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM43BQ6ZT52 329 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 C11orf57Q6ZUT1 292 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF410Q86VK4 478 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM72BQ86X60 149 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 APLFQ8IW19 511 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZC3H3Q8IXZ2 948 aaKnown RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 KLHDC1Q8N7A1 406 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 NKAIN3Q8N8D7 197 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 RASGEF1AQ8N9B8 481 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TMEM161BQ8NDZ6 487 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 OCC1Q8TAD7 63 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 GOLGA5Q8TBA6 731 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 SCFD1Q8WVM8 642 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 HPSE2Q8WWQ2 592 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 P2RX5Q93086 422 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 EXOC4Q96A65 974 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 GLT1D1Q96MS3 346 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 FERMT1Q9BQL6 677 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 PIGQQ9BRB3 760 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 POLR3FQ9H1D9 316 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 C2orf40Q9H1Z8 148 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 EXOC7Q9UPT5 735 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRAF3IP3Q9Y228 551 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 TCF19Q9Y242 345 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 MICAL3Q7RTP6 2002 aa4.43□□□□□ -1.7
HMGB3P19-201ENST00000403971 A0A0U1RQG5 324 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 KBTBD13C9JR72 458 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 GOLGA6L19H0YKK7 550 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 K7ERI5 159 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 MAPK13O15264 365 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 RPS6KA5O75582 802 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CLPTM1O96005 669 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 IGKV3-20P01619 116 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 PIGRP01833 764 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 GPIP06744 558 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CFC1P0CG37 223 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF18P17022 549 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 ADRA2CP18825 462 aa4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 NMT1P30419 496 aaKnown RBP4.42□□□□□ -1.7
HMGB3P19-201ENST00000403971 CHRNB4P30926 498 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 668.5 ms