RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 A0A1B0GTW7 788 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 GLOD5A6NK44 160 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 HCRTR1O43613 425 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 SOAT1P35610 550 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 AQP4P55087 323 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 MANFP55145 182 aaKnown RBP24.28■■□□□ 1.48
CPNE1-205ENST00000401607 BNIP3Q12983 259 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 BIRC2Q13490 618 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 SLC25A45Q8N413 288 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 OR52N2Q8NGI0 321 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 IL21RQ9HBE5 538 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 ACSS1Q9NUB1 689 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-205ENST00000401607 UTS2RQ9UKP6 389 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 TMEM131Q92545 1883 aa24.28■■□□□ 1.48
CPNE1-205ENST00000401607 USP34Q70CQ2 3546 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 PGRMC2O15173 223 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 PROM1O43490 865 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 CDH3P22223 829 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 UQCRC2P22695 453 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 FASP25445 335 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 SUZ12Q15022 739 aaKnown RBP24.27■■□□□ 1.48
CPNE1-205ENST00000401607 SHBQ15464 509 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 NKG7Q16617 165 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 C19orf47Q8N9M1 422 aaKnown RBP24.27■■□□□ 1.48
CPNE1-205ENST00000401607 KLHL6Q8WZ60 621 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 ZBED6CLQ96FA7 236 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-205ENST00000401607 RNF145Q96MT1 663 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 SLC35C2Q9NQQ7 365 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 SIRT3Q9NTG7 399 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-205ENST00000401607 OLAHQ9NV23 265 aa24.27■■□□□ 1.48
CPNE1-205ENST00000401607 MRPS2Q9Y399 296 aaKnown RBP24.27■■□□□ 1.48
CPNE1-205ENST00000401607 URADA6NGE7 173 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 SERPINA1P01009 418 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 EIF2S1P05198 315 aaKnown RBP24.26■■□□□ 1.47
CPNE1-205ENST00000401607 GIMD1P0DJR0 217 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 BMP2P12643 396 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 IL1RNP18510 177 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CASP9P55211 416 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 MLC1Q15049 377 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 IRGCQ6NXR0 463 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 ANGPTL8Q6UXH0 198 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 ANKFN1Q8N957 763 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CATSPER1Q8NEC5 780 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 GAB3Q8WWW8 586 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CHID1Q9BWS9 393 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 ROGDIQ9GZN7 287 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 NEUROD4Q9HD90 331 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 RAPGEFL1Q9UHV5 662 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CES1P1Q9UKY3 287 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 FAM149AA5PLN7 773 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 TNFRSF21O75509 655 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 MT-ND1P03886 318 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 FCGR1AP12314 374 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 ETFAP13804 333 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CHI3L1P36222 383 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CDK9P50750 372 aaKnown RBP24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CSTF1Q05048 431 aaKnown RBP24.26■■□□□ 1.47
CPNE1-205ENST00000401607 HSPB3Q12988 150 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 DEFB134Q4QY38 66 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 C6orf132Q5T0Z8 1188 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 TMEM214Q6NUQ4 689 aaKnown RBP24.26■■□□□ 1.47
CPNE1-205ENST00000401607 SERINC2Q96SA4 455 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 MAP3K3Q99759 626 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 UGT2B28Q9BY64 529 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 GLIPR2Q9H4G4 154 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 SNX8Q9Y5X2 465 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 CSNK1G3Q9Y6M4 447 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 RNF215Q9Y6U7 377 aa24.26■■□□□ 1.47
CPNE1-205ENST00000401607 GOLGA4Q13439 2230 aaKnown RBP24.25■■□□□ 1.47
CPNE1-205ENST00000401607 RNF103-CHMP3A0A140T963 221 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 SLC9B1P1A6NJY1 282 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 ZSCAN9O15535 394 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-205ENST00000401607 PRKD3O94806 890 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 RAP2AP10114 183 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 CRATP43155 626 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 VEZF1Q14119 521 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 FAM98BQ52LJ0 330 aaKnown RBP24.25■■□□□ 1.47
CPNE1-205ENST00000401607 SLC48A1Q6P1K1 146 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 ABHD13Q7L211 337 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 RNF130Q86XS8 419 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 CSNK1A1LQ8N752 337 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 PSMA8Q8TAA3 256 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 MAL2Q969L2 176 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 ELF4Q99607 663 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-205ENST00000401607 NLNQ9BYT8 704 aa24.25■■□□□ 1.47
CPNE1-205ENST00000401607 KRT75O95678 551 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 ALOX12P18054 663 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 VSX2P58304 361 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-205ENST00000401607 FADDQ13158 208 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 DEFB110Q30KQ9 67 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 MANEAQ5SRI9 462 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 SAXO2Q658L1 398 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 C1orf210Q8IVY1 113 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 ZNF655Q8N720 491 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-205ENST00000401607 EME1Q96AY2 570 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 AMDHD1Q96NU7 426 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 C1GALT1Q9NS00 363 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 KCMF1Q9P0J7 381 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 TECTAO75443 2155 aa24.24■■□□□ 1.47
CPNE1-205ENST00000401607 MYO1GB0I1T2 1018 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms