RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 RPL38P63173 70 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 KLC1Q07866 573 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 SF3A3Q12874 501 aaKnown RBP eCLIP15.03■□□□□ -0
HMGA1-204ENST00000401473 VASH2Q86V25 355 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 MMP21Q8N119 569 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 FKBP10Q96AY3 582 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 MESP1Q9BRJ9 268 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 SOX17Q9H6I2 414 aaPredicted RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 NPHS2Q9NP85 383 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 WDR70Q9NW82 654 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 GNG14A0A1W2PPG7 69 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 ARHGAP10A1A4S6 786 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 EFSO43281 561 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 DIAPH2O60879 1101 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 RECKO95980 971 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 ANXA4P09525 319 aaPredicted RBP15.02■□□□□ -0
HMGA1-204ENST00000401473 RAB40ALP0C0E4 278 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 RNH1P13489 461 aaKnown RBP15.02■□□□□ -0
HMGA1-204ENST00000401473 LIFP15018 202 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 WT1P19544 449 aaPredicted RBP15.02■□□□□ -0
HMGA1-204ENST00000401473 RAB38P57729 211 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 BTG2P78543 158 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 OCA2Q04671 838 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 DNASE1L3Q13609 305 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 FAM47BQ8NA70 645 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 FNDC5Q8NAU1 212 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 KCNE4Q8WWG9 221 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 MIEF2Q96C03 454 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 DCBLD2Q96PD2 775 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 C1orf50Q9BV19 199 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 DCTN4Q9UJW0 460 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 TCFL5Q9UL49 500 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 MED13Q9UHV7 2174 aa15.02■□□□□ -0
HMGA1-204ENST00000401473 GLOD5A6NK44 160 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 C21orf140B9A014 251 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 C9J4A7 227 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 PGRMC2O15173 223 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 KLK10O43240 276 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 B4GALT2O60909 372 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 UMODP07911 640 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 FHP07954 510 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 BCKDHAP12694 445 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 SDC1P18827 310 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 PTPN4P29074 926 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 DIO3P55073 304 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 TAS2R50P59544 299 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 GNGT1P63211 74 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 MC1RQ01726 317 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 EMX2Q04743 252 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 LSM12Q3MHD2 195 aaKnown RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 IL23RQ5VWK5 629 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 MED25Q71SY5 747 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 CLNKQ7Z7G1 428 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 C16orf78Q8WTQ4 265 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 CHMP6Q96FZ7 201 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 OR1F2PQ96R84 312 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 GPR87Q9BY21 358 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 ACTL8Q9H568 366 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 WDR54Q9H977 334 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 GPN3Q9UHW5 284 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 ADAM21Q9UKJ8 722 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 MKL2Q9ULH7 1088 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 EXO1Q9UQ84 846 aaKnown RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 TMED5Q9Y3A6 229 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 CLDN16Q9Y5I7 305 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 ALDOCP09972 364 aaKnown RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 CPN2P22792 545 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 RPS15P62841 145 aaKnown RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 NDUFAF5Q5TEU4 345 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 TMEM198Q66K66 360 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 SPACA3Q8IXA5 215 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 EFCAB3Q8N7B9 438 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 OR2Y1Q8NGV0 311 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 NUDT8Q8WV74 236 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 VN1R1Q9GZP7 353 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 GPN2Q9H9Y4 310 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 MS4A12Q9NXJ0 267 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 HEY2Q9UBP5 337 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 PTRH2Q9Y3E5 179 aaKnown RBP15.01□□□□□ -0.01
HMGA1-204ENST00000401473 PCDHGA6Q9Y5G7 932 aa15.01□□□□□ -0.01
HMGA1-204ENST00000401473 TMEM8BA6NDV4 472 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 VPS4BO75351 444 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 AIFM1O95831 613 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 LBPP18428 481 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 IL10P22301 178 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 ITPKBP27987 946 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 ERVK-8P63133 956 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 MINDY4Q4G0A6 757 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 ACTRT2Q8TDY3 377 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 TRIM55Q9BYV6 548 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 RPF2Q9H7B2 306 aaKnown RBP15□□□□□ -0.01
HMGA1-204ENST00000401473 LYARQ9NX58 379 aaKnown RBP15□□□□□ -0.01
HMGA1-204ENST00000401473 NUP210LQ5VU65 1888 aa15□□□□□ -0.01
HMGA1-204ENST00000401473 GMNCA6NCL1 334 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 IDSB3KWA1 339 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TGFBR3LH3BV60 316 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 PSMD12O00232 456 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-204ENST00000401473 LDB3O75112 727 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms