RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 TMEM121BQ9BXQ6 578 aaPredicted RBP24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 EBF1Q9UH73 591 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 LOC100130705A0A1B0GUX0 176 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 A6NCN8 305 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 CCDC160A6NGH7 325 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 TMEM229AB2RXF0 380 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 VILLO15195 856 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 NARSO43776 548 aaKnown RBP24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 ASGR2P07307 311 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 ITGAMP11215 1152 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 TSFMP43897 325 aaKnown RBP24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 RABIFP47224 123 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 HSPB3Q12988 150 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 SPDYE7PQ495Y7 208 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 IQCCQ4KMZ1 466 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 ABHD17CQ6PCB6 329 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 Q6ZSR6 202 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 TAMM41Q96BW9 452 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 RUBCNLQ9H714 662 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 PDP1Q9P0J1 537 aaPredicted RBP24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 C5AR2Q9P296 337 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 MYO10Q9HD67 2058 aa24.47■■□□□ 1.51
SHARPIN-202ENST00000398712 PRAMEF26H0Y7S4 382 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 SLC16A6O15403 523 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 C9P02748 559 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 FESP07332 822 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 CDH2P19022 906 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 HIST1H1TP22492 207 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 PIGAP37287 484 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 PEX19P40855 299 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 SLC19A1P41440 591 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 CCR5P51681 352 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 STXBP1P61764 594 aaKnown RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 ESRRGP62508 458 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 TFF2Q03403 129 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 TGM3Q08188 693 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 SMAD4Q13485 552 aaKnown RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 KIR2DS3Q14952 304 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 RBM48Q5RL73 367 aaKnown RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 CEACAM20Q6UY09 585 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 PSMA8Q8TAA3 256 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 ZNF347Q96SE7 839 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 DDX18Q9NVP1 670 aaKnown RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 ZSCAN32Q9NX65 697 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 PNMA8BQ9ULN7 279 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 NDRG2Q9UN36 371 aaKnown RBP24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 PCDHGB3Q9Y5G1 929 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 DGKBQ9Y6T7 804 aa24.46■■□□□ 1.51
SHARPIN-202ENST00000398712 LRP4O75096 1905 aa24.45■■□□□ 1.51
SHARPIN-202ENST00000398712 C10orf142B7Z368 130 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 M0QX08 132 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 PPM1DO15297 605 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 ZW10O43264 779 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 AHCYL1O43865 530 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 IGLV3-19P01714 112 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 OPN1SWP03999 348 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 HOXB3P14651 431 aaPredicted RBP24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 CD72P21854 359 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 HLCSP50747 726 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 RPS6KA3P51812 740 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 PCBP3P57721 371 aaKnown RBP24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 RPS15AP62244 130 aaKnown RBP24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 ILF3Q12906 894 aaKnown RBP eCLIP24.45■■□□□ 1.54e-7■■■■□ 25.5
SHARPIN-202ENST00000398712 SLAMF1Q13291 335 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 KDM4DQ6B0I6 523 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 PAQR7Q86WK9 346 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 PIK3C3Q8NEB9 887 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 FLCNQ8NFG4 579 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 A4GALTQ9NPC4 353 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 PRDM7Q9NQW5 492 aa24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 SIRT3Q9NTG7 399 aaPredicted RBP24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 THUMPD1Q9NXG2 353 aaKnown RBP24.45■■□□□ 1.5
SHARPIN-202ENST00000398712 ADAMDEC1O15204 470 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 MBTPS2O43462 519 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 UGT2B11O75310 529 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 STATHP02808 62 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ITGA2P17301 1181 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ATP5A1P25705 553 aaKnown RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 NTSP30990 170 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 DGKEP52429 567 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 SH3BGRP55822 239 aaPredicted RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 PRRT3Q5FWE3 981 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 TJAP1Q5JTD0 557 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 REEP3Q6NUK4 255 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ABI3BPQ7Z7G0 1075 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ACOT4Q8N9L9 421 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 HDAC2Q92769 488 aaKnown RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 BARD1Q99728 777 aaKnown RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 KIF17Q9P2E2 1029 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 BRWD1Q9NSI6 2320 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 SNRNP200O75643 2136 aaKnown RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 SZT2Q5T011 3432 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 C5orf58C9J3I9 102 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 BTN3A3O00478 584 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 SH3BP5O60239 455 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 TNFP01375 233 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ELK4P28324 431 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 DAPP51397 102 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 KIAA0895LQ68EN5 471 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 MRM1Q6IN84 353 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms