RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RPP38P78345 283 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 POU6F2P78424 691 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 MADCAM1Q13477 382 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 C16orf78Q8WTQ4 265 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZSWIM3Q96MP5 696 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 C8orf33Q9H7E9 229 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNAJC27Q9NZQ0 273 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 MARK1Q9P0L2 795 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ERVK-11Q9UQG0 969 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PCDHB14Q9Y5E9 798 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR6C74A6NCV1 312 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PDCD5O14737 125 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 MUSKO15146 869 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 XPNPEP2O43895 674 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 HLA-DPB1P04440 258 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 AGXTP21549 392 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF267Q14586 743 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 GINS1Q14691 196 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 HSDL2Q6YN16 418 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PGBD5Q8N414 524 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 FOXJ1Q92949 421 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 UTP4Q969X6 686 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 METTL2AQ96IZ6 378 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 SMOXQ9NWM0 555 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RNF6Q9Y252 685 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR45Q9Y5Y3 372 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 KLKB1P03952 638 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PIM1P11309 404 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ETFAP13804 333 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RHCEP18577 417 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 CCR7P32248 378 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 HLCSP50747 726 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PON3Q15166 354 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RNASE12Q5GAN4 147 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR52E8Q6IFG1 317 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 MARCH9Q86YJ5 346 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC25A36Q96CQ1 311 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM80Q96HE8 168 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 SCML1Q9UN30 329 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 KNL1Q8NG31 2342 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 C9J4A7 227 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARNTLO00327 626 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RLN1P04808 185 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 TIMP2P16035 220 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 TPRG1LQ5T0D9 272 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 SUN3Q8TAQ9 357 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 GNPDA2Q8TDQ7 276 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 MZB1Q8WU39 189 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PDCD10Q9BUL8 212 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 C20orf27Q9GZN8 174 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 HEBP1Q9NRV9 189 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 FEZF1A0PJY2 475 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ANXA2P2A6NMY6 339 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR39O43194 453 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PCDHGA12O60330 932 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 TRIM3O75382 744 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SOX30O94993 753 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ANXA2P07355 339 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PPP3R1P63098 170 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 HYAL2Q12891 473 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 GTDC1Q4AE62 458 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR4C11Q6IEV9 310 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ENPP6Q6UWR7 440 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PARS2Q7L3T8 475 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 RTN4RL1Q86UN2 441 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 MCEMP1Q8IX19 187 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PHOSPHO1Q8TCT1 267 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM203Q969S6 136 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 C3orf30Q96M34 536 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ACSL6Q9UKU0 697 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SOCS2O14508 198 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 F11P03951 625 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 IFNA6P05013 189 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARSAP15289 507 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 NPRL3Q12980 569 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 LRP8Q14114 963 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 EXOC3L2Q2M3D2 409 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARL9Q6T311 187 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC36A4Q6YBV0 504 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 PLA2G15Q8NCC3 412 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR51I1Q9H343 314 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 MARCH7Q9H992 704 aa13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 LIN28AQ9H9Z2 209 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-201ENST00000398587 TRIM36Q9NQ86 728 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms