RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CLHC1Q8NHS4 586 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 TBC1D20Q96BZ9 403 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 TGIF2Q9GZN2 237 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ZNF385DQ9H6B1 395 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 HEY2Q9UBP5 337 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ZNF282Q9UDV7 671 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 G3BP2Q9UN86 482 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 PCDHA9Q9Y5H5 950 aa18.36■□□□□ 0.53
MAP1LC3A-203ENST00000397709 VSTM2BA6NLU5 285 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 FAM227AF5H4B4 570 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 PSMD12O00232 456 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ANKRD28O15084 1053 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 BMP10O95393 424 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 FHP07954 510 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 NR2F6P10588 404 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 BUD31P41223 144 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ATP4BP51164 291 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 C21orf58P58505 322 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 IRX1P78414 480 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 TBC1D25Q3MII6 688 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 PDCD4Q53EL6 469 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 DTX1Q86Y01 620 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 FAM9CQ8IZT9 166 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 MMP21Q8N119 569 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 FAM47BQ8NA70 645 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 TMEM52Q8NDY8 209 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 CDC26Q8NHZ8 85 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 YIPF2Q9BWQ6 316 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 FAIM2Q9BWQ8 316 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 RBCK1Q9BYM8 510 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ACTL8Q9H568 366 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 PRDM9Q9NQV7 894 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 SDR39U1Q9NRG7 319 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 LANCL2Q9NS86 450 aa18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 EXO1Q9UQ84 846 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3A-203ENST00000397709 BLACEA4D250 179 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 C9J4A7 227 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 CNOT3O75175 753 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 PRKRAO75569 313 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 DRD2P14416 443 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 TLX1P31314 330 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 STAT5AP42229 794 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 HNRNPFP52597 415 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 CLDN8P56748 225 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 MC1RQ01726 317 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 OCA2Q04671 838 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 C2orf80Q0P641 193 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 SQLEQ14534 574 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 HEPACAMQ14CZ8 416 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 NCF4Q15080 339 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 NKG7Q16617 165 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 VWA2Q5GFL6 755 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 GKAP1Q5VSY0 366 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 RIMKLAQ8IXN7 391 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 STT3BQ8TCJ2 826 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 CT55Q8WUE5 264 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 WDR54Q9H977 334 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 C14orf105Q9NVL8 296 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 GPN3Q9UHW5 284 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 ARL2BPQ9Y2Y0 163 aa18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 COPG1Q9Y678 874 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3A-203ENST00000397709 C1orf226A1L170 272 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 TERTO14746 1132 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 PRMT3O60678 531 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 JRKO75564 520 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 LRATO95237 230 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 FURINP09958 794 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 RAB40ALP0C0E4 278 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 ZGLP1P0C6A0 271 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 NCF2P19878 526 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 DDCP20711 480 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 JAK1P23458 1154 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 ERV3-1Q14264 604 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 OR52E8Q6IFG1 317 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 ZNF595Q8IYB9 648 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 CACNA2D3Q8IZS8 1091 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 MIER2Q8N344 545 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 CPSF7Q8N684 471 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 KRTCAP2Q8N6L1 136 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 BCAS4Q8TDM0 211 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 UCN3Q969E3 161 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 NKD1Q969G9 470 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 GFM2Q969S9 779 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 MIEF2Q96C03 454 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 ZNF764Q96H86 408 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 SLC45A3Q96JT2 553 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 SPSB2Q99619 263 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 REEP4Q9H6H4 257 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 RPF2Q9H7B2 306 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 WDR41Q9HAD4 459 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 ZIM2Q9NZV7 527 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 CES1P1Q9UKY3 287 aa18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 MRPS33Q9Y291 106 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3A-203ENST00000397709 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
MAP1LC3A-203ENST00000397709 NDUFAB1O14561 156 aa18.32■□□□□ 0.52
MAP1LC3A-203ENST00000397709 SCAMP2O15127 329 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3A-203ENST00000397709 PGRMC2O15173 223 aa18.32■□□□□ 0.52
MAP1LC3A-203ENST00000397709 AKAP10O43572 662 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms