RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NPAP1Q9NZP6 1156 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 OLFM2O95897 454 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CSF3P09919 207 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 DDOSTP39656 456 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 PDE7AQ13946 482 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
NUP98-204ENST00000397004 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 DCLRE1CQ96SD1 692 aaKnown RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 GPA33Q99795 319 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 TMEM246Q9BRR3 403 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 BRF2Q9HAW0 419 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 C3orf14Q9HBI5 128 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 ABCB9Q9NP78 766 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CNOT2Q9NZN8 540 aaKnown RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 ENPP4Q9Y6X5 453 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CKAP5Q14008 2032 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 SLC35F4A4IF30 521 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 ERVH48-1M5A8F1 160 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 SP140Q13342 867 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 E2F2Q14209 437 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 LIPKQ5VXJ0 399 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 ZNF544Q6NX49 715 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 PHC2Q8IXK0 858 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 TP53I13Q8NBR0 393 aaPredicted RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 FGF11Q92914 225 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 TMEM203Q969S6 136 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 C11orf54Q9H0W9 315 aaPredicted RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 REEP4Q9H6H4 257 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 MVB12BQ9H7P6 319 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CCDC177Q9NQR7 707 aaPredicted RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 ZNF282Q9UDV7 671 aaPredicted RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 PCDHGB2Q9Y5G2 931 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 A0A0X1KG70 313 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 MGAT4DA6NG13 374 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 SLC16A5O15375 505 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 IGSF6O95976 241 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CSF2P04141 144 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 GAS1P54826 345 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CAV3P56539 151 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 OLR1P78380 273 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 TCTN3Q6NUS6 607 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 OR56A3Q8NH54 315 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 UCN3Q969E3 161 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 TRMT2BQ96GJ1 504 aaKnown RBP13.28□□□□□ -0.28
NUP98-204ENST00000397004 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 MTG2Q9H4K7 406 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 CXorf36Q9H7Y0 433 aa13.28□□□□□ -0.28
NUP98-204ENST00000397004 FAM172BPA6NC97 362 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 A8MVJ9 347 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 PLK4O00444 970 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 APOL3O95236 402 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 NPPBP16860 134 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 SOX6P35712 828 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 CD79BP40259 229 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 CLPPQ16740 277 aaPredicted RBP13.27□□□□□ -0.28
NUP98-204ENST00000397004 Q6ZVU0 165 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.28
NUP98-204ENST00000397004 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.28
NUP98-204ENST00000397004 ASCC1Q8N9N2 400 aaKnown RBP13.27□□□□□ -0.28
NUP98-204ENST00000397004 TM9SF4Q92544 642 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 VPS35Q96QK1 796 aa13.27□□□□□ -0.28
NUP98-204ENST00000397004 DNMT3AQ9Y6K1 912 aaPredicted RBP13.27□□□□□ -0.28
NUP98-204ENST00000397004 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 PRAMEF27A3QJZ7 478 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 EFCAB10A6NFE3 127 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 KRT8P05787 483 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 ITGB7P26010 798 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 KIR2DL3P43628 341 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 SPHARQ15513 63 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 PAMR1Q6UXH9 720 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 FAM181AQ8N9Y4 354 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 REV3LO60673 3130 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 PLXNA2O75051 1894 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 PNMA8CA0A1B0GUJ8 204 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 ZNF670-ZNF695F2Z2N8 137 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 NTN1O95631 604 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 CD72P21854 359 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 TAS2R50P59544 299 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 VEPH1Q14D04 833 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 ZNF438Q7Z4V0 828 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 MEX3DQ86XN8 651 aaKnown RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 SLC34A3Q8N130 599 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 ZNF480Q8WV37 535 aa13.27□□□□□ -0.29
NUP98-204ENST00000397004 BHLHE41Q9C0J9 482 aaPredicted RBP13.27□□□□□ -0.29
NUP98-204ENST00000397004 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms