RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 POLDIP3Q9BY77 421 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 GRXCR1A8MXD5 290 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 HPRP00739 348 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PRKCGP05129 697 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 C7P10643 843 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CCDC32Q9BV29 185 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 B4DGG1 531 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ACTR1BP42025 376 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 OR1E2P47887 323 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ACTR1AP61163 376 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CILP2Q8IUL8 1156 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PRKYO43930 277 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ARHGAP40Q5TG30 622 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 KCTD18Q6PI47 426 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 C15orf52Q6ZUT6 534 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 STK35Q8TDR2 534 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 TSPAN15O95858 294 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CHRNA1P02708 482 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ALPIP09923 528 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 MAP2K4P45985 399 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 LAPTM4AQ15012 233 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF529Q6P280 563 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CNIH3Q8TBE1 160 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 FNIP2Q9P278 1114 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ZFR2Q9UPR6 939 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 FKTNO75072 461 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 DGKZQ13574 1117 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CYP27C1Q4G0S4 372 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ENDOVQ8N8Q3 282 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 GAS2L1Q99501 681 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 C7orf50Q9BRJ6 194 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PTGES2Q9H7Z7 377 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 C19orf12Q9NSK7 152 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 TAS2R8Q9NYW2 309 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 LRFN1Q9P244 771 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 GBAP04062 536 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 DLDP09622 509 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 CAMLGP49069 296 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 RAB4BP61018 213 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 NKX6-1P78426 367 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 NFATC2Q13469 925 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM164Q5U3C3 297 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 KCTD13Q8WZ19 329 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 URM1Q9BTM9 101 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 PLEKHA3Q9HB20 300 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ANKRD13BQ86YJ7 626 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 NELL2Q99435 816 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ERVK13-1Q9NX77 482 aa13.47□□□□□ -0.25
COL4A3-202ENST00000396578 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF850A8MQ14 1090 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 DFNA5O60443 496 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 AHSGP02765 367 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 BDKRB1P46663 353 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 SOX2P48431 317 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 SMPDL3AQ92484 453 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 HYLS1Q96M11 299 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 C19orf25Q9UFG5 118 aaPredicted RBP13.46□□□□□ -0.25
COL4A3-202ENST00000396578 RNF11Q9Y3C5 154 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 PCDH17O14917 1159 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
COL4A3-202ENST00000396578 CLIC3O95833 236 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 PFKLP17858 780 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 RAB4AP20338 218 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 RABGGTBP53611 331 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 RABL3Q5HYI8 236 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 OSBPL2Q9H1P3 480 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF225Q9UK10 706 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 TRBV2A0A0J9YWF9 115 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 CD8B2A6NJW9 211 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 ANKRD66B4E2M5 251 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 FAAHO00519 579 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 CD8BP10966 210 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 PLP2Q04941 152 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 SLC22A10Q63ZE4 541 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 TMPRSS12Q86WS5 348 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 MAN2C1Q9NTJ4 1040 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 GXYLT2A0PJZ3 443 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 OR6C74A6NCV1 312 aa13.46□□□□□ -0.25
COL4A3-202ENST00000396578 DIRAS3O95661 229 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms