RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SVOPQ8N4V2 548 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 SLC5A8Q8N695 610 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 OR2A1Q8NGT9 310 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 APH1BQ8WW43 257 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 CCDC90BQ9GZT6 254 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 SIRT3Q9NTG7 399 aaPredicted RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 WARS2Q9UGM6 360 aaKnown RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 A0A0A6YYD5 115 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ARRDC5A6NEK1 342 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 RGS10O43665 173 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 LCMT2O60294 686 aaKnown RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 PCDHGA12O60330 932 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 FAM20BO75063 409 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 RECKO95980 971 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 BCL10O95999 233 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ZNF182P17025 639 aaPredicted RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 GALK1P51570 392 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 CDH12P55289 794 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 TEKQ02763 1124 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 EXOC3L2Q2M3D2 409 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 TMEM35AQ53FP2 167 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PARM1Q6UWI2 310 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 CEACAM20Q6UY09 585 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 HORMAD2Q8N7B1 307 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 APOBEC4Q8WW27 367 aaKnown RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 RORBQ92753 470 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ZBED6CLQ96FA7 236 aaPredicted RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 ABCG4Q9H172 646 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 MVB12BQ9H7P6 319 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PLCXD1Q9NUJ7 323 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ACER3Q9NUN7 267 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 AASSQ9UDR5 926 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PCDHGA2Q9Y5H1 932 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 SNX8Q9Y5X2 465 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 DRD2P14416 443 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 RHCEP18577 417 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 IGFALSP35858 605 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 MASP1P48740 699 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 ALDH9A1P49189 494 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 MAPK10P53779 464 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 KCNC4Q03721 635 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 SHHQ15465 462 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 ZIC1Q15915 447 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 MOGQ16653 247 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 OR4C11Q6IEV9 310 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 LGI4Q8N135 537 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 ZNF540Q8NDQ6 660 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 EZH1Q92800 747 aaPredicted RBP15.96■□□□□ 0.15
NUP50-202ENST00000396096 FGF14Q92915 247 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 SCARF2Q96GP6 870 aaPredicted RBP15.96■□□□□ 0.15
NUP50-202ENST00000396096 TRMT61BQ9BVS5 477 aaKnown RBP15.96■□□□□ 0.15
NUP50-202ENST00000396096 C1QTNF7Q9BXJ2 289 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 SLC17A9Q9BYT1 436 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 PBX4Q9BYU1 374 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 OSGEPL1Q9H4B0 414 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 FBXL12Q9NXK8 326 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 EHD3Q9NZN3 535 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 KCND3Q9UK17 655 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 RAB23Q9ULC3 237 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 RNF6Q9Y252 685 aa15.96■□□□□ 0.15
NUP50-202ENST00000396096 TRANK1O15050 2925 aa15.96■□□□□ 0.14
NUP50-202ENST00000396096 A0A1W2PQU0 124 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 EPOPA6NHQ4 379 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 PRICKLE3O43900 615 aaPredicted RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 BCAS1O75363 584 aaPredicted RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 GABARAPO95166 117 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 MT-ND2P03891 347 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 TFPTP0C1Z6 253 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 LAMP2P13473 410 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ARFIP1P53367 373 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 BNIP3Q12983 259 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 AQP6Q13520 282 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 CLCA4Q14CN2 919 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 CTF1Q16619 201 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 SMN1Q16637 294 aaKnown RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 SLC38A5Q8WUX1 472 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 KLK6Q92876 244 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 YIPF6Q96EC8 236 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 KCNC2Q96PR1 638 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 GABRG3Q99928 467 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 AICDAQ9GZX7 198 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 FBRSQ9HAH7 460 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 IMP3Q9NV31 184 aaKnown RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 TEX10Q9NXF1 929 aaPredicted RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 KCNK6Q9Y257 313 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ZNF451Q9Y4E5 1061 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 LRIT2A6NDA9 550 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 CACNB4O00305 520 aaPredicted RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 LINC01565O15544 149 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 B4GALT2O60909 372 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 RNGTTO60942 597 aaKnown RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 TIE1P35590 1138 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ABATP80404 500 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ZNF829Q3KNS6 432 aaPredicted RBP15.95■□□□□ 0.14
NUP50-202ENST00000396096 UAP1L1Q3KQV9 507 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 ADPRMQ3LIE5 342 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 KIAA1211LQ6NV74 962 aa15.95■□□□□ 0.14
NUP50-202ENST00000396096 GPR153Q6NV75 609 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms