RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PALMDQ9NP74 551 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 PAK6Q9NQU5 681 aaPredicted RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 MS4A12Q9NXJ0 267 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 SLC25A37Q9NYZ2 338 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 STON1Q9Y6Q2 735 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 NUMA1Q14980 2115 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 OTOFQ9HC10 1997 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TCRBV5S2A0A599 114 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TRIM43BA6NCK2 446 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 FOXE1O00358 373 aaPredicted RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 SNPHO15079 494 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TBX1O43435 398 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 BCAS1O75363 584 aaPredicted RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 AGR2O95994 175 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 OR12D1P0DN82 309 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 HOXB2P14652 356 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 ITIH1P19827 911 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 C5AR1P21730 350 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 AKT2P31751 481 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 AVPR1BP47901 424 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 SLC6A11P48066 632 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 MRPL19P49406 292 aaKnown RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 CSRP3P50461 194 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 CRISP1P54107 249 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 CXCR4P61073 352 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 HBA1P69905 142 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 ABATP80404 500 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 GRSF1Q12849 480 aaKnown RBP eCLIP6.27□□□□□ -1.41
BDNF-203ENST00000395978 ARHGAP19Q14CB8 494 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 TMEM35AQ53FP2 167 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 MZT2AQ6P582 158 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TAF8Q7Z7C8 310 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TRUB1Q8WWH5 349 aaKnown RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 DNASE1L2Q92874 299 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 CIDECQ96AQ7 238 aaPredicted RBP6.27□□□□□ -1.41
BDNF-203ENST00000395978 PHF21AQ96BD5 680 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TAMM41Q96BW9 452 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 DPH7Q9BTV6 452 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 LMAN2LQ9H0V9 348 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 PELI2Q9HAT8 420 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 TMEM27Q9HBJ8 222 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 NECTIN3Q9NQS3 549 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 OR1A2Q9Y585 309 aa6.27□□□□□ -1.41
BDNF-203ENST00000395978 LOC285556D6RIA3 1793 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 A0A0J9YVX5 310 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 A0A1B0GTW7 788 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 CASKO14936 926 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 AXIN1O15169 862 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 TLX2O43763 284 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 STX11O75558 287 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 JRKO75564 520 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 SEMA3DO95025 777 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ATE1O95260 518 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ASGR2P07307 311 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 NUDT7P0C024 238 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ITGAMP11215 1152 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 CCR4P51679 360 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 SMSP52788 366 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 VLDLRP98155 873 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 PUS10Q3MIT2 529 aaKnown RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 CCSMST1Q4G0I0 132 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ZNF691Q5VV52 312 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 TMPRSS11AQ6ZMR5 421 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ADIPOR2Q86V24 386 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 RANBP3LQ86VV4 465 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 TCEANCQ8N8B7 351 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 CAMKVQ8NCB2 501 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 DENND6BQ8NEG7 585 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 GAB3Q8WWW8 586 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 FGF13Q92913 245 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 TMEM19Q96HH6 336 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 EPYCQ99645 322 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 HDHD2Q9H0R4 259 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 IKZF5Q9H5V7 419 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ANKHQ9HCJ1 492 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 KLHL1Q9NR64 748 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 MAT2BQ9NZL9 334 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 NDOR1Q9UHB4 597 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 PPT2Q9UMR5 302 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ST14Q9Y5Y6 855 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 CXorf51AA0A1B0GTR3 108 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 SLC5A10A0PJK1 596 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ASPDHA6ND91 283 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 FAAHO00519 579 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 STSP08842 583 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 CHRM5P08912 532 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 SAGP10523 405 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 ALPPL2P10696 532 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 HOXA9P31269 272 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 ST3GAL3Q11203 375 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 STX4Q12846 297 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 SLAMF1Q13291 335 aa6.26□□□□□ -1.41
BDNF-203ENST00000395978 MAD2L1BPQ15013 274 aaPredicted RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 TSTQ16762 297 aaKnown RBP6.26□□□□□ -1.41
BDNF-203ENST00000395978 SLC5A12Q1EHB4 618 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms