RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DNASE1L1P49184 302 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 MAN2A2P49641 1150 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 LIM2P55344 173 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 PPP1R7Q15435 360 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 CEBPEQ15744 281 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 HP1BP3Q5SSJ5 553 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 WDR53Q7Z5U6 358 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 MORN4Q8NDC4 146 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 PTPMT1Q8WUK0 201 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 CFAP36Q96G28 342 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 PBKQ96KB5 322 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 PWWP2AQ96N64 755 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 GPATCH1Q9BRR8 931 aaKnown RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 CNPPD1Q9BV87 410 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 PLAC1Q9HBJ0 212 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 SACM1LQ9NTJ5 587 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF358Q9NW07 568 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 TUBA8Q9NY65 449 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-203ENST00000394925 ST6GALNAC2Q9UJ37 374 aa19.55■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF354AO60765 605 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-203ENST00000394925 CTNSO60931 367 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 WDR1O75083 606 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 TNNI3P19429 210 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 CERS1P27544 350 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 HNMTP50135 292 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 RNF4P78317 190 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 CDKL1Q00532 357 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 FOXO1Q12778 655 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 STX4Q12846 297 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SLC10A1Q14973 349 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SLC25A35Q3KQZ1 300 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 C1orf185Q5T7R7 199 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 WLSQ5T9L3 541 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 TRIM40Q6P9F5 258 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 TRMT10BQ6PF06 316 aaKnown RBP19.54■□□□□ 0.72
TRAF4-203ENST00000394925 KRT78Q8N1N4 520 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 GOLM1Q8NBJ4 401 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 OR2L5Q8NG80 312 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 OR14A16Q8NHC5 309 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SLCO2A1Q92959 643 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SARAFQ96BY9 339 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SGCZQ96LD1 299 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SERINC2Q96SA4 455 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 NAP1L3Q99457 506 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-203ENST00000394925 REXO4Q9GZR2 422 aaKnown RBP19.54■□□□□ 0.72
TRAF4-203ENST00000394925 EXO5Q9H790 373 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SEMA4BQ9NPR2 832 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-203ENST00000394925 VTI1BQ9UEU0 232 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 ASIC3Q9UHC3 531 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 DAPP1Q9UN19 280 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 OARD1Q9Y530 152 aa19.54■□□□□ 0.72
TRAF4-203ENST00000394925 SYNDIG1LA6NDD5 238 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 ANKDD1BA6NHY2 528 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 PGRMC1O00264 195 aaKnown RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 DNALI1O14645 258 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 SUSD5O60279 629 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 CLEC3AO75596 197 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 TBX6O95947 436 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 P04436 131 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 CCL3P10147 92 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 KIR2DL3P43628 341 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 ZNF460Q14592 562 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 OPN5Q6U736 354 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 FRA10AC1Q70Z53 315 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 NKAPQ8N5F7 415 aaKnown RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 CLEC4MQ9H2X3 399 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 COPS7BQ9H9Q2 264 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-203ENST00000394925 ATG4BQ9Y4P1 393 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 ARHGAP21Q5T5U3 1957 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 ABCA2Q9BZC7 2435 aa19.53■□□□□ 0.72
TRAF4-203ENST00000394925 C17orf105B2RV13 164 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 GSTM2P28161 218 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 SLC6A12P48065 614 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 FNTAP49354 379 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 MTTPP55157 894 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 RCN2Q14257 317 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 EFTUD2Q15029 972 aaKnown RBP eCLIP19.52■□□□□ 0.725e-8■■■■■ 30.2
TRAF4-203ENST00000394925 TSNQ15631 228 aaKnown RBP19.52■□□□□ 0.72
TRAF4-203ENST00000394925 HYAL4Q2M3T9 481 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 ADPRMQ3LIE5 342 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 ADNP2Q6IQ32 1131 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 ABHD17CQ6PCB6 329 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 VN1R5Q7Z5H4 357 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 MMP21Q8N119 569 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 OR5L2Q8NGL0 311 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 OR8K3Q8NH51 312 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 SLC2A12Q8TD20 617 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 ANKRD7Q92527 254 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 RHBDF1Q96CC6 855 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 RMND5BQ96G75 393 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-203ENST00000394925 NT5DC2Q9H857 520 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 CHMP2BQ9UQN3 213 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 PLEKHA6Q9Y2H5 1048 aa19.52■□□□□ 0.72
TRAF4-203ENST00000394925 VPS13CQ709C8 3753 aa19.52■□□□□ 0.71
TRAF4-203ENST00000394925 TRGV5A0A0B4J1U4 118 aa19.51■□□□□ 0.71
TRAF4-203ENST00000394925 NCF1BA6NI72 391 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-203ENST00000394925 NCF1CA8MVU1 366 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-203ENST00000394925 LDB3O75112 727 aa19.51■□□□□ 0.71
TRAF4-203ENST00000394925 NCF1P14598 390 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-203ENST00000394925 DNASE1P24855 282 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms