RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ANXA8P13928 327 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 HMGCLP35914 325 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ALDH16A1Q8IZ83 802 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ELMOD1Q8N336 334 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 GOLM1Q8NBJ4 401 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CHST14Q8NCH0 376 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ATP6V1C2Q8NEY4 427 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CCDC120Q96HB5 630 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 MYLKQ15746 1914 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 LOC102723532A0A0G2JNH3 316 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SCO1O75880 301 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SLC16A8O95907 504 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 IGHA2P01877 340 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SOD2P04179 222 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CSF2RAP15509 400 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ITGA2P17301 1181 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CLCN7P51798 805 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 RAB14P61106 215 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 TUBA1BP68363 451 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 GRIK2Q13002 908 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 TUBA1AQ71U36 451 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 MMP21Q8N119 569 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 NLGN4YQ8NFZ3 816 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 PIK3R3Q92569 461 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ITPKCQ96DU7 683 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 AGAP4Q96P64 663 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ARNTLO00327 626 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 C8AP07357 584 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SDC2P34741 201 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 GRK5P34947 590 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 WASP42768 502 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CLCN4P51793 760 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ATP12AP54707 1039 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 DPY19L3Q6ZPD9 716 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 WDR53Q7Z5U6 358 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 IQCHQ86VS3 1027 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 MARCH9Q86YJ5 346 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 FAM20CQ8IXL6 584 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SLC37A3Q8NCC5 494 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF671Q8TAW3 534 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 KLK6Q92876 244 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-202ENST00000394820 TSSK6Q9BXA6 273 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CLMPQ9H6B4 373 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SLC25A13Q9UJS0 675 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 PRELID1Q9Y255 219 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 SPEGQ15772 3267 aa12.66□□□□□ -0.38
NFKB1-202ENST00000394820 MYOFQ9NZM1 2061 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 TSPAN6O43657 245 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 RETP07949 1114 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 HLA-EP13747 358 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-202ENST00000394820 IL20RBQ6UXL0 311 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 TMEM25Q86YD3 366 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 NARS2Q96I59 477 aaKnown RBP12.65□□□□□ -0.38
NFKB1-202ENST00000394820 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 UCK2Q9BZX2 261 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 MUTYHQ9UIF7 546 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 DOCK6Q96HP0 2047 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 FAM186AA6NE01 2351 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 GREB1Q4ZG55 1949 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ISPDA4D126 451 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 FKTNO75072 461 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 KCNK5O95279 499 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 PEPDP12955 493 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 TGM1P22735 817 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 APEX1P27695 318 aaKnown RBP12.65□□□□□ -0.38
NFKB1-202ENST00000394820 PPP2R1BP30154 601 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF45Q02386 682 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 CHST9Q7L1S5 443 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF433Q8N7K0 673 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-202ENST00000394820 LILRB4Q8NHJ6 448 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 HUS1BQ8NHY5 278 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
NFKB1-202ENST00000394820 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms