RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRAMEF4O60810 478 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 STK16O75716 305 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 OR6B1O95007 311 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 SCELO95171 688 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 SOX3P41225 446 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 HK2P52789 917 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 PCDH1Q08174 1060 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 BIKQ13323 160 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 C18orf21Q32NC0 220 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 TMEM35AQ53FP2 167 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 PRAMEF9Q5VWM5 478 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 IL20RBQ6UXL0 311 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 RTL4Q6ZR62 310 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 GPSM1Q86YR5 675 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 CREG2Q8IUH2 290 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 ANKMY2Q8IV38 441 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 DMRTC2Q8IXT2 367 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 PDPRQ8NCN5 879 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 CAPZA3Q96KX2 299 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 FAM173AQ9BQD7 235 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 TBCDQ9BTW9 1192 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 ALOXE3Q9BYJ1 711 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 TTTY12Q9BZ98 90 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 IL1RL2Q9HB29 575 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 NPDC1Q9NQX5 325 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 WWOXQ9NZC7 414 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 TNFRSF10DQ9UBN6 386 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 KCNN3Q9UGI6 736 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 ITGB1BP2Q9UKP3 347 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 SUSD5O60279 629 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 IFNA16P05015 189 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 HOXD4P09016 255 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 CERS1P27544 350 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 RNF4P78317 190 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 TBL3Q12788 808 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 STX4Q12846 297 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 DOC2AQ14183 400 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 FASTKD3Q14CZ7 662 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 PDK4Q16654 411 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 HIST2H2ACQ16777 129 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 MPEG1Q2M385 716 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 GXYLT1Q4G148 440 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 HIST2H2AA3Q6FI13 130 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 OPN5Q6U736 354 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 KLHL7Q8IXQ5 586 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 FAM109AQ8N4B1 249 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 BBOF1Q8ND07 529 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 UBE2E3Q969T4 207 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 UBXN10Q96LJ8 280 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 CSF3RQ99062 836 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 DEFB127Q9H1M4 99 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 PTBP2Q9UKA9 531 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 SPACA6W5XKT8 324 aa16.21■□□□□ 0.19
SNRPA1-202ENST00000394082 ZNF407Q9C0G0 2248 aa16.21■□□□□ 0.18
SNRPA1-202ENST00000394082 PINLYPA6NC86 204 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 NCF1BA6NI72 391 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 FIGNL2A6NMB9 653 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 NCF1CA8MVU1 366 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 WWP2O00308 870 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 PDE9AO76083 593 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 NCF1P14598 390 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CD1DP15813 335 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CD22P20273 847 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 ACVR2AP27037 513 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 SERPINB1P30740 379 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 PLGLB1Q02325 96 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 PMPCAQ10713 525 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 ZKSCAN8Q15776 578 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 C16orf47Q6ZP98 133 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 NUBPLQ8TB37 319 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CDKL2Q92772 493 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 SCYL1Q96KG9 808 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 GPR22Q99680 433 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 CPNE1Q99829 537 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 MS4A8Q9BY19 250 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 SACM1LQ9NTJ5 587 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 RNF14Q9UBS8 474 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 MTO1Q9Y2Z2 717 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
SNRPA1-202ENST00000394082 DNAJC13O75165 2243 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 EFCAB8A8MWE9 144 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 C17orf105B2RV13 164 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 AQP7O14520 342 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 STMN1P16949 149 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 EPORP19235 508 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 ATP5A1P25705 553 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 HSPA7P48741 367 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 NUP107P57740 925 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 IGLV3-21P80748 117 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 FOXO1Q12778 655 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 TRILQ7L0X0 811 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 LRRC70Q7Z2Q7 622 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 UBE3DQ7Z6J8 389 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 LAS2Q8IYD9 372 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 DND1Q8IYX4 353 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 ZBED8Q8IZ13 594 aa16.19■□□□□ 0.18
SNRPA1-202ENST00000394082 CLYBLQ8N0X4 340 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms