RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 RPH3AQ9Y2J0 694 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-202ENST00000393773 ATG4BQ9Y4P1 393 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 KCNE2Q9Y6J6 123 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 NINQ8N4C6 2090 aa14.22□□□□□ -0.13
CHMP3-202ENST00000393773 DOCK7Q96N67 2140 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 MPDZO75970 2070 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SYNDIG1LA6NDD5 238 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 CLDN4O14493 209 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 PROM1O43490 865 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 B3GALT2O43825 422 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 FAM155BO75949 473 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 TTC4O95801 387 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 CNR1P21554 472 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 CERS1P27544 350 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SLC6A12P48065 614 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 MAN2A2P49641 1150 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 LIM2P55344 173 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 CDKL1Q00532 357 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 BMPR2Q13873 1038 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SLBPQ14493 270 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHMP3-202ENST00000393773 RIPPLY2Q5TAB7 128 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 ADNP2Q6IQ32 1131 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 ADGRD1Q6QNK2 874 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SLCO4C1Q6ZQN7 724 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 IGDCC3Q8IVU1 814 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-202ENST00000393773 MORN4Q8NDC4 146 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 TTLQ8NG68 377 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 OR8K3Q8NH51 312 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 GABPB2Q8TAK5 448 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-202ENST00000393773 MS4A14Q96JA4 679 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 ZNF703Q9H7S9 590 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SEMA4BQ9NPR2 832 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-202ENST00000393773 SACM1LQ9NTJ5 587 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 CRIM1Q9NZV1 1036 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 DAPP1Q9UN19 280 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 PLEKHA6Q9Y2H5 1048 aa14.21□□□□□ -0.13
CHMP3-202ENST00000393773 MYOCOSA0A1B0GUC4 107 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 C1GALT1C1LP0DN25 315 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 GSTM2P28161 218 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 RNF4P78317 190 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 C18orf21Q32NC0 220 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-202ENST00000393773 TEDDM1Q5T9Z0 273 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 TMIGD1Q6UXZ0 262 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 FAM47EQ6ZV65 393 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 SEM1Q6ZVN7 128 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 WDR53Q7Z5U6 358 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-202ENST00000393773 OR2L5Q8NG80 312 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 DAZLQ92904 295 aaKnown RBP14.2□□□□□ -0.14
CHMP3-202ENST00000393773 SARAFQ96BY9 339 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 PWWP2AQ96N64 755 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 SH3GL2Q99962 352 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 WDR83Q9BRX9 315 aaKnown RBP14.2□□□□□ -0.14
CHMP3-202ENST00000393773 OR8D2Q9GZM6 311 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 SH2D2AQ9NP31 389 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 B4GALT7Q9UBV7 327 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 VTI1BQ9UEU0 232 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 VWA7Q9Y334 891 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 OARD1Q9Y530 152 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 CLCA3PQ9Y6N3 262 aa14.2□□□□□ -0.14
CHMP3-202ENST00000393773 A0A088AWK7 358 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ATP6AP2A0A1C7CYW4 349 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 HCN1O60741 890 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 CLEC3AO75596 197 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ATP6AP2O75787 350 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 WDR47O94967 919 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 IFNA16P05015 189 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 DRD2P14416 443 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 GNAZP19086 355 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF10P21506 573 aaPredicted RBP14.19□□□□□ -0.14
CHMP3-202ENST00000393773 GDF5P43026 501 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 KIR2DL3P43628 341 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 PLA2G16P53816 162 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ADAM8P78325 824 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF460Q14592 562 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 WLSQ5T9L3 541 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 TRIM40Q6P9F5 258 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ABHD17CQ6PCB6 329 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 TRMT10BQ6PF06 316 aaKnown RBP14.19□□□□□ -0.14
CHMP3-202ENST00000393773 OPN5Q6U736 354 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 PAMR1Q6UXH9 720 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 CDC20BQ86Y33 519 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 SLC2A12Q8TD20 617 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 CCT6BQ92526 530 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 MBD6Q96DN6 1003 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 SGCZQ96LD1 299 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 SERINC2Q96SA4 455 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 EGFL8Q99944 293 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 NAT9Q9BTE0 207 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 REXO4Q9GZR2 422 aaKnown RBP14.19□□□□□ -0.14
CHMP3-202ENST00000393773 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 DMRT3Q9NQL9 472 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 TRMT1Q9NXH9 659 aaKnown RBP14.19□□□□□ -0.14
CHMP3-202ENST00000393773 ACAD8Q9UKU7 415 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 CBLCQ9ULV8 474 aa14.19□□□□□ -0.14
CHMP3-202ENST00000393773 TRGV5A0A0B4J1U4 118 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 LRRC3CA6NJW4 275 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 A6NNC1 897 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 C17orf105B2RV13 164 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms