RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FBXO39Q8N4B4 442 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM89BQ8N5H3 189 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CPSF7Q8N684 471 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GCSAMQ8N6F7 178 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 EMC1Q8N766 993 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAAF3Q8N9W5 541 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC38A9Q8NBW4 561 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC150Q8NCX0 1101 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CCNYQ8ND76 341 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CHDHQ8NE62 594 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CATSPER1Q8NEC5 780 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5M9Q8NGP3 310 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNRF2Q8NHG8 242 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CD99L2Q8TCZ2 262 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GIPC2Q8TF65 315 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C7orf33Q8WU49 177 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GIMAP1Q8WWP7 306 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM158Q8WZ71 300 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 UBXN4Q92575 508 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 USP6NLQ92738 828 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DAZLQ92904 295 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TNFRSF14Q92956 283 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ARHGEF2Q92974 986 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NINJ1Q92982 152 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 HGDQ93099 445 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MUL1Q969V5 352 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ARRDC3Q96B67 414 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CREB3L1Q96BA8 519 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM149B1Q96BN6 582 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SNRNP40Q96DI7 357 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IQCDQ96DY2 449 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CMTM5Q96DZ9 223 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 L3HYPDHQ96EM0 354 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MVB12AQ96EY5 273 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C5orf30Q96GV9 206 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBED3Q96IU2 234 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PIWIL1Q96J94 861 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC41A2Q96JW4 573 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C4orf45Q96LM5 186 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 HARBI1Q96MB7 349 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C20orf166-AS1Q96NR2 134 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 WFIKKN1Q96NZ8 548 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF317Q96PQ6 595 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NEK1Q96PY6 1258 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR2M2Q96R28 347 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IL4I1Q96RQ9 567 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ARID3AQ99856 593 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LBHD1Q9BQE6 289 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TXNDC17Q9BRA2 123 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 HDHD3Q9BSH5 251 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PCGF1Q9BSM1 259 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF416Q9BWM5 594 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 BCL2L13Q9BXK5 485 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX13AQ9BXU3 409 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 AGXT2Q9BYV1 514 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MAGEB5Q9BZ81 275 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TTTY12Q9BZ98 90 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NUF2Q9BZD4 464 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 VN1R1Q9GZP7 353 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CLPBQ9H078 707 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MIS12Q9H081 205 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PCDHAC1Q9H158 963 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CARD9Q9H257 536 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IFI27L2Q9H2X8 130 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 Q9H3A6 140 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LIME1Q9H400 295 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DENND2DQ9H6A0 471 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 XKR8Q9H6D3 395 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NARFLQ9H6Q4 476 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DCLRE1BQ9H816 532 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MINDY3Q9H8M7 445 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNK13Q9HB14 408 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZFP14Q9HCL3 533 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ARFGAP3Q9NP61 516 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 VTA1Q9NP79 307 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ITM2CQ9NQX7 267 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXO8Q9NRD0 319 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ABCC13Q9NSE7 274 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM207AQ9NSI2 230 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LIN7CQ9NUP9 197 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC52A1Q9NWF4 448 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OSER1Q9NX31 292 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MARCH5Q9NX47 278 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GDAP2Q9NXN4 497 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KLHL28Q9NXS3 571 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DDX56Q9NY93 547 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SPG21Q9NZD8 308 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SIRPGQ9P1W8 387 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CACNG4Q9UBN1 327 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 UBA2Q9UBT2 640 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 STK39Q9UEW8 545 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR12D3Q9UGF7 316 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IP6K2Q9UHH9 426 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP6V1HQ9UI12 483 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CNOT7Q9UIV1 285 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KCND3Q9UK17 655 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GMEB2Q9UKD1 530 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ELF5Q9UKW6 265 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 STUB1Q9UNE7 303 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF24Q9Y225 148 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms