RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 VNN3Q9NY84 501 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 CLEC4EQ9ULY5 219 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 CCL27Q9Y4X3 112 aa2.26□□□□□ -2.05
TRAV40-201ENST00000390467 A0A087WV48 116 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 A0A0B4J203 849 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 ANXA2P2A6NMY6 339 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 KRT3P12035 628 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 ADRA2CP18825 462 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 TIA1P31483 386 aaKnown RBP eCLIP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 MDH2P40926 338 aaKnown RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 ID1P41134 155 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 BRCC3P46736 316 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 NPY4RP50391 375 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 CEACAM7Q14002 265 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 ABRAXAS2Q15018 415 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 TCP11X2Q5H9J9 407 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 C9orf129Q5T035 196 aaKnown RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 SLC30A6Q6NXT4 461 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 RFPL4BQ6ZWI9 263 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 ERN2Q76MJ5 926 aaKnown RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 CHST3Q7LGC8 479 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 MEX3DQ86XN8 651 aaKnown RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 CACUL1Q86Y37 369 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 SLC22A18ASQ8N1D0 253 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 C8orf46Q8TAG6 207 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 RIT1Q92963 219 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 PKNOX2Q96KN3 472 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 MAPKAP1Q9BPZ7 522 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 UBE2TQ9NPD8 197 aaPredicted RBP2.25□□□□□ -2.05
TRAV40-201ENST00000390467 PLSCR3Q9NRY6 295 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 MED17Q9NVC6 651 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 PLEKHA6Q9Y2H5 1048 aa2.25□□□□□ -2.05
TRAV40-201ENST00000390467 C2orf92A0A1B0GVN3 265 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 MCF2LO15068 1137 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CCDC175P0C221 793 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CCDC159P0C7I6 412 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 SKILP12757 684 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ACKR3P25106 362 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ALDH3B1P43353 468 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 RGRP47804 291 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 RAD23AP54725 363 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CXCL6P80162 114 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 TGIF1Q15583 401 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 GSG1Q2KHT4 349 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 HERC4Q5GLZ8 1057 aaPredicted RBP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 MFSD4BQ5TF39 518 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 FAM91A1Q658Y4 838 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF776Q68DI1 518 aaPredicted RBP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF530Q6P9A1 599 aaPredicted RBP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF730Q6ZMV8 503 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 NLRP14Q86W24 1093 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ELMOD1Q8N336 334 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 TMEM99Q8N816 258 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CLEC1AQ8NC01 280 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 KIF18AQ8NI77 898 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 ZBED6CLQ96FA7 236 aaPredicted RBP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CCM2Q9BSQ5 444 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 PAXXQ9BUH6 204 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 RABEP2Q9H5N1 569 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 S100A14Q9HCY8 104 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 CLIC5Q9NZA1 410 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 RCOR3Q9P2K3 495 aaPredicted RBP2.24□□□□□ -2.05
TRAV40-201ENST00000390467 TMED7Q9Y3B3 224 aa2.24□□□□□ -2.05
TRAV40-201ENST00000390467 WI2-2373I1.2A0A1W2PRP0 233 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 CCDC162PA2VCL2 907 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 C5orf52A6NGY3 159 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ANKDD1BA6NHY2 528 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 TMCO5BA8MYB1 307 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 NEDD8-MDP1E9PL57 170 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 GBAP04062 536 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 FHP07954 510 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 FAM58BPP0C7Q3 252 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 FOSL2P15408 326 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 PDGFRAP16234 1089 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 GPX3P22352 226 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 PTAFRP25105 342 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 GDF1P27539 372 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 GJB2P29033 226 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 EEF1DP29692 281 aaKnown RBP2.23□□□□□ -2.05
TRAV40-201ENST00000390467 FHITP49789 147 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 NAGLUP54802 743 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ABRQ12979 859 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 LCP2Q13094 533 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 WSCD1Q658N2 575 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF544Q6NX49 715 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 KRT74Q7RTS7 529 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ADCK2Q7Z695 626 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 UBQLNLQ8IYU4 475 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 NME8Q8N427 588 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 Q8NFD4 153 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF564Q8TBZ8 553 aaPredicted RBP2.23□□□□□ -2.05
TRAV40-201ENST00000390467 U2AF1L4Q8WU68 220 aaKnown RBP2.23□□□□□ -2.05
TRAV40-201ENST00000390467 ASB8Q9H765 288 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 NT5DC2Q9H857 520 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 MOKQ9UQ07 419 aa2.23□□□□□ -2.05
TRAV40-201ENST00000390467 A0A0U1RQG5 324 aaPredicted RBP2.22□□□□□ -2.05
TRAV40-201ENST00000390467 TNFSF11O14788 317 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 SCO2O43819 266 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms