RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LILRB2Q8N423 598 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 OR6M1Q8NGM8 313 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SLC9A6Q92581 669 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 UFD1Q92890 307 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 FATE1Q969F0 183 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 TSSK3Q96PN8 268 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 GSX2Q9BZM3 304 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 NT5DC2Q9H857 520 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 FZD3Q9NPG1 666 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 PHF11Q9UIL8 331 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SGK494L7N484 410 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 IRAK2O43187 625 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 ACSM4P0C7M7 580 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 HLA-DPA1P20036 260 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 TACR1P25103 407 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 CLCN4P51793 760 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 MLLT11Q13015 90 aaPredicted RBP14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 SNAPC1Q16533 368 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 EXOC3L2Q2M3D2 409 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 SYNPOQ8N3V7 929 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 NANOGP1Q8N7R0 232 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 DNAJC5GQ8N7S2 189 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 OR6C4Q8NGE1 309 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 OR9Q2Q8NGE9 314 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 PXYLP1Q8TE99 480 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 AP3S1Q92572 193 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 MED18Q9BUE0 208 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 MND1Q9BWT6 205 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 SERHL2Q9H4I8 314 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 NSUN3Q9H649 340 aaKnown RBP14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 NLE1Q9NVX2 485 aaPredicted RBP14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 COMMD3Q9UBI1 195 aa14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 PRG3Q9Y2Y8 225 aaPredicted RBP14.02□□□□□ -0.16
VPS9D1-201ENST00000389386 TAPBPO15533 448 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 TLR5O60602 858 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 PROS1P07225 676 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 POU2F1P14859 743 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 CD9P21926 228 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 CNR2P34972 360 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 GPR15P49685 360 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 METAP1DQ6UB28 335 aaPredicted RBP14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 SBSNQ6UWP8 590 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 RTL4Q6ZR62 310 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 GPR155Q7Z3F1 870 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 ADGRD2Q7Z7M1 963 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 DENND1CQ8IV53 801 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 BBS7Q8IWZ6 715 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 PCSK9Q8NBP7 692 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 CEP76Q8TAP6 659 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 HHIPQ96QV1 700 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 P2RY13Q9BPV8 354 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 DOHHQ9BU89 302 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 REG4Q9BYZ8 158 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 ELOVL2Q9NXB9 296 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 CPNE7Q9UBL6 633 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF222Q9UK12 451 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.17
VPS9D1-201ENST00000389386 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 A0A1W2PPL8 197 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 ZAR1LA6NP61 321 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF140P52738 457 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 CDH12P55289 794 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 HSF2Q03933 536 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PUDPQ08623 228 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 NCF4Q15080 339 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 DUOXA1Q1HG43 343 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 ALFQ53S48 1182 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 C6orf132Q5T0Z8 1188 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 AFTPHQ6ULP2 937 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 RASGRP3Q8IV61 690 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 LAS2Q8IYD9 372 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PIANPQ8IYJ0 282 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 UMODL1-AS1Q8N2C9 162 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SPPL2AQ8TCT8 520 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 TMEM203Q969S6 136 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PSMG2Q969U7 264 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 B3GALT6Q96L58 329 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 FAM193BQ96PV7 902 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SEMA3CQ99985 751 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PRR14Q9BWN1 585 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 C1QTNF6Q9BXI9 259 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SARS2Q9NP81 518 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 LYARQ9NX58 379 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 FTSJ1Q9UET6 329 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 STON1Q9Y6Q2 735 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 A8MVJ9 347 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 FPGTO14772 594 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 FFAR2O15552 330 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 HPGDSO60760 199 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 LRATO95237 230 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PTX3P26022 381 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SLC6A1P30531 599 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SSTR2P30874 369 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 EVX1P49640 407 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 STK19P49842 368 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 ABRQ12979 859 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 LRRC32Q14392 662 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms