RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 IFNEQ86WN2 208 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 ARHGEF39Q8N4T4 335 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 DTWD1Q8N5C7 304 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 SUMF1Q8NBK3 374 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 OR8J3Q8NGG0 315 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 SLC41A2Q96JW4 573 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 CNDP2Q96KP4 475 aaKnown RBP25.38■■□□□ 1.65
MSX1-201ENST00000382723 ZNF285Q96NJ3 590 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 PCDHAC1Q9H158 963 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 IKZF5Q9H5V7 419 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 ANKHQ9HCJ1 492 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 UTS2RQ9UKP6 389 aa25.38■■□□□ 1.65
MSX1-201ENST00000382723 PDPK1O15530 556 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 MS4A2Q01362 244 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 INAVAQ3KP66 663 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 D2HGDHQ8N465 521 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 HIPK4Q8NE63 616 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 OR5T3Q8NGG3 340 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 OR9A4Q8NGU2 314 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 RHBDD1Q8TEB9 315 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 KLHL6Q8WZ60 621 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 PCDHGB4Q9UN71 923 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 PCDHGB2Q9Y5G2 931 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 C1orf226A1L170 272 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 TMEM150CB9EJG8 249 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 AGRPO00253 132 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 MGRN1O60291 552 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 MED26O95402 600 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 FOLR1P15328 257 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 DDX5P17844 614 aaKnown RBP25.37■■□□□ 1.65
MSX1-201ENST00000382723 NELFEP18615 380 aaKnown RBP25.37■■□□□ 1.65
MSX1-201ENST00000382723 CPN2P22792 545 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 SOX11P35716 441 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 HBA1P69905 142 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 LRRC74AQ0VAA2 488 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 TCTE1Q5JU00 501 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 ATOH1Q92858 354 aaPredicted RBP25.37■■□□□ 1.65
MSX1-201ENST00000382723 C10orf90Q96M02 699 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 ALG2Q9H553 416 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 EHD3Q9NZN3 535 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 KCMF1Q9P0J7 381 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 PHF11Q9UIL8 331 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 DAPP1Q9UN19 280 aa25.37■■□□□ 1.65
MSX1-201ENST00000382723 RP1P56715 2156 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 HYKKA2RU49 373 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 LDOC1O95751 146 aaPredicted RBP25.36■■□□□ 1.65
MSX1-201ENST00000382723 C1QCP02747 245 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 ZNF806P0C7X5 589 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 NR2F6P10588 404 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 GSK3BP49841 420 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 NDUFA9Q16795 377 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 TMTC4Q5T4D3 741 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 KMT5CQ86Y97 462 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 SHISA5Q8N114 240 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 CLEC4FQ8N1N0 589 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 ECSITQ9BQ95 431 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 ZNF768Q9H5H4 540 aaKnown RBP25.36■■□□□ 1.65
MSX1-201ENST00000382723 SLAMF7Q9NQ25 335 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 SUCOQ9UBS9 1254 aaKnown RBP25.36■■□□□ 1.65
MSX1-201ENST00000382723 WDR87Q6ZQQ6 2873 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 ZNF318Q5VUA4 2279 aa25.36■■□□□ 1.65
MSX1-201ENST00000382723 A0A0A6YYC8 382 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 I3L1I5 382 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 RDH16O75452 317 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 ERAL1O75616 437 aaKnown RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 BUD31P41223 144 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 ACTR3P61158 418 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 TNFRSF17Q02223 184 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 SPEM2Q0P670 501 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 DBX2Q6ZNG2 339 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 RCBTB1Q8NDN9 531 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 OR4D9Q8NGE8 314 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 CSF3RQ99062 836 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 SH3GL1Q99961 368 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 KCTD14Q9BQ13 255 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 CPPED1Q9BRF8 314 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 RXFP3Q9NSD7 469 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 VPS4AQ9UN37 437 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 USP22Q9UPT9 525 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 FLRT2O43155 660 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 OR2B3O76000 313 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 HNRNPFP52597 415 aaKnown RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 MANFP55145 182 aaKnown RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 EEFSECP57772 596 aaKnown RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 TCF15Q12870 199 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 FLOT2Q14254 428 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 TRIM25Q14258 630 aaKnown RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 SLC48A1Q6P1K1 146 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 ZNF764Q96H86 408 aaPredicted RBP25.35■■□□□ 1.65
MSX1-201ENST00000382723 SLC35C2Q9NQQ7 365 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 TAS2R7Q9NYW3 318 aa25.35■■□□□ 1.65
MSX1-201ENST00000382723 SCN3AQ9NY46 2000 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 IGHV5-10-1A0A0J9YXX1 117 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 CDX4O14627 284 aaPredicted RBP25.34■■□□□ 1.65
MSX1-201ENST00000382723 TOX3O15405 576 aaPredicted RBP25.34■■□□□ 1.65
MSX1-201ENST00000382723 HSD17B1P14061 328 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 CKMT2P17540 419 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 GAB1Q13480 694 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 PRSS33Q8NF86 280 aa25.34■■□□□ 1.65
MSX1-201ENST00000382723 ASB9Q96DX5 294 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms