RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 FCGR2AP12318 317 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 MYL9P24844 172 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 SLC15A1P46059 708 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 GPR19Q15760 415 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 KLHDC10Q6PID8 442 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 LRRC25Q8N386 305 aaPredicted RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 PAPD5Q8NDF8 572 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR1J2Q8NGS2 313 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 TIMM29Q9BSF4 260 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 HCAR1Q9BXC0 346 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 HDHD5Q9BXW7 423 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 PIGUQ9H490 435 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 DHCR7Q9UBM7 475 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 TIMM22Q9Y584 194 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 A0A1W2PQ09 198 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 RIPK2O43353 540 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CXXC5Q7LFL8 322 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR4N5Q8IXE1 308 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 C11orf65Q8NCR3 313 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 RAB8BQ92930 207 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CDC42EP4Q9H3Q1 356 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 PARPBPQ9NWS1 579 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 MARCH5Q9NX47 278 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 A0A1W2PP18 115 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 PMS2P1A4D2B8 440 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 NUDT19A8MXV4 375 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 ANKRD28O15084 1053 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 IFNW1P05000 195 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 SPINK2P20155 84 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 GABRA2P47869 451 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 RPS23P62266 143 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 CWF19L1Q69YN2 538 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 KYAT3Q6YP21 454 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 MRPL21Q7Z2W9 205 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 FJX1Q86VR8 437 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 C1orf52Q8N6N3 182 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR52E1Q8NGJ3 308 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR9A4Q8NGU2 314 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 NARS2Q96I59 477 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 DENND2DQ9H6A0 471 aaPredicted RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 CTPS2Q9NRF8 586 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 TMLHEQ9NVH6 421 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 NOSIPQ9Y314 301 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 MAGED1Q9Y5V3 778 aaPredicted RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 BTAF1O14981 1849 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 TULP2O00295 520 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 BCL10O95999 233 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 EBLN1P0CF75 366 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 GLB1P16278 677 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 ATF6P18850 670 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 KCNC3Q14003 757 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 HES1Q14469 280 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR8B8Q15620 311 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 MPP7Q5T2T1 576 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 SPATC1Q76KD6 591 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 OR5L1Q8NGL2 311 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 ESAMQ96AP7 390 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 BDH2Q9BUT1 245 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 DUSP26Q9BV47 211 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 BHLHE41Q9C0J9 482 aaPredicted RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 DHRS7Q9Y394 339 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 A0A1B0GVI7 797 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 YY2O15391 372 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 OR4F21O95013 312 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 PRPS2P11908 318 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 CKMT1AP12532 417 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 IDO1P14902 403 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 CD82P27701 267 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 ADPRHP54922 357 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 ZNF846Q147U1 533 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 ZCCHC23Q6ZST2 131 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 APOPT1Q96IL0 206 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 MRPL39Q9NYK5 338 aaKnown RBP8.8□□□□□ -1
LIMCH1-202ENST00000381753 ARHGAP20Q9P2F6 1191 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 CDH22Q9UJ99 828 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SLC22A3O75751 556 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 IFNA2P01563 188 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 MAGP20916 626 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 RPS9P46781 194 aaKnown RBP8.8□□□□□ -1
LIMCH1-202ENST00000381753 CLCQ05315 142 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 LRRC36Q1X8D7 754 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 PAPD4Q6PIY7 484 aaKnown RBP8.8□□□□□ -1
LIMCH1-202ENST00000381753 PLCZ1Q86YW0 608 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 ZNF276Q8N554 614 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SMRP1Q8NCR6 262 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SLC35F5Q8WV83 523 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 MARK4Q96L34 752 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SERINC2Q96SA4 455 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 OR51V1Q9H2C8 321 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 LRFN1Q9P244 771 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 COPG2Q9UBF2 871 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 ING4Q9UNL4 249 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 NKX6-3A6NJ46 265 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SRPX2O60687 465 aaPredicted RBP8.8□□□□□ -1
LIMCH1-202ENST00000381753 LCA5LO95447 670 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 PRSS56P0CW18 603 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
LIMCH1-202ENST00000381753 FCRLBQ6BAA4 426 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
LIMCH1-202ENST00000381753 CXorf57Q6NSI4 855 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms