RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 FICDQ9BVA6 458 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.4
RIPK1-202ENST00000380409 PRDM12Q9H4Q4 367 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
RIPK1-202ENST00000380409 DLL4Q9NR61 685 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 LATS2Q9NRM7 1088 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 RBM22Q9NW64 420 aaKnown RBP eCLIP6.31□□□□□ -1.4
RIPK1-202ENST00000380409 TMEM45AQ9NWC5 275 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 FBXL2Q9UKC9 423 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 PCDHGC4Q9Y5F7 938 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 PCDHGA6Q9Y5G7 932 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 PCDHGA1Q9Y5H4 931 aa6.31□□□□□ -1.4
RIPK1-202ENST00000380409 H7C2Y5 167 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FAM20BO75063 409 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 WISP3O95389 354 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 C1RP00736 705 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PRKAR1AP10644 381 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 G6PDP11413 515 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CXCL3P19876 107 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 LAP3P28838 519 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 EPHA2P29317 976 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 KCNJ3P48549 501 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PRMT2P55345 433 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ZP1P60852 638 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 EFEMP1Q12805 493 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 DSG2Q14126 1118 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CHRNA6Q15825 494 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 RBBP7Q16576 425 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FAM98BQ52LJ0 330 aaKnown RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 WSCD1Q658N2 575 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FAM92BQ6ZTR7 304 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 AHSA2Q719I0 299 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 NLRC3Q7RTR2 1065 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 GALNT5Q7Z7M9 940 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 TMEM145Q8NBT3 493 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 LRRC46Q96FV0 321 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 TEX37Q96LM6 180 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 DUSP26Q9BV47 211 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 GSDMCQ9BYG8 508 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ULBP1Q9BZM6 244 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 EGLN1Q9GZT9 426 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 XYLT2Q9H1B5 865 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ATP13A1Q9HD20 1204 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 NT5MQ9NPB1 228 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 TREM2Q9NZC2 230 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 SLAMF8Q9P0V8 285 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CYTH4Q9UIA0 394 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CDH9Q9ULB4 789 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 OGDHLQ9ULD0 1010 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ASB1Q9Y576 335 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ANKRD12Q6UB98 2062 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 LYRM1O43325 122 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ORC5O43913 435 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 LILRB5O75023 590 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 HPP00738 406 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FHP07954 510 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 HAPLN1P10915 354 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ARF4P18085 180 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FPR3P25089 353 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PAX6P26367 422 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 MST1P26927 711 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CEACAM6P40199 344 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CRYBB2P43320 205 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ELP6Q0PNE2 266 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CRHR2Q13324 411 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 HABP2Q14520 560 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PON3Q15166 354 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FAM83EQ2M2I3 478 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 LCN1P1Q5VSP4 162 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 NADSYN1Q6IA69 706 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 FAHD1Q6P587 224 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ADGRD2Q7Z7M1 963 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ADGRF3Q8IZF5 1079 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ARRDC1Q8N5I2 433 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF548Q8NEK5 533 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 GGHQ92820 318 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF419Q96HQ0 510 aaPredicted RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CSPG4P5Q96PW8 444 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CDCA4Q9BXL8 241 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 RHBGQ9H310 441 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 OSGEPL1Q9H4B0 414 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 AKTIPQ9H8T0 292 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 SLC28A3Q9HAS3 691 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CRYL1Q9Y2S2 319 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CDH23Q9H251 3354 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 MEX3AA1L020 520 aaKnown RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 SUPT3HB4E1H0 165 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 SULT1C2O00338 296 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CLDN4O14493 209 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PDCD5O14737 125 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 CASC3O15234 703 aaKnown RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 ADAM12O43184 909 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 PPIHO43447 177 aaKnown RBP6.3□□□□□ -1.4
RIPK1-202ENST00000380409 NDUFS3O75489 264 aa6.3□□□□□ -1.4
RIPK1-202ENST00000380409 GADD45GO95257 159 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms