RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SPATA7Q9P0W8 599 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PSME2Q9UL46 239 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 NDRG4Q9ULP0 352 aaKnown RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ABCG2Q9UNQ0 655 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM98Q9Y2Y6 226 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 LOC100130705A0A1B0GUX0 176 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OR5K4A6NMS3 321 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 H3BM21 787 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 NOBOXO60393 691 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 MTX2O75431 263 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 RPN2P04844 631 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ZNF883P0CG24 379 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PCNAP12004 261 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 GPX2P18283 190 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 RANBP1P43487 201 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 RAE1P78406 368 aaKnown RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CDK5R2Q13319 367 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OTUD3Q5T2D3 398 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ZNF648Q5T619 568 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ZC3H14Q6PJT7 736 aaKnown RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TSSK4Q6SA08 328 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ZNF554Q86TJ5 538 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TRIM74Q86UV6 250 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 VRK3Q8IV63 474 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 POP5Q969H6 163 aaKnown RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM159Q96B96 161 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PYURFQ96I23 114 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 GSDMCQ9BYG8 508 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 MVB12BQ9H7P6 319 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 DOCK9Q9BZ29 2069 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OR2AG2A6NM03 316 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 H0Y8X5 98 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 BCAS1O75363 584 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CLPXO76031 633 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 KCNK5O95279 499 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TRIM16O95361 564 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CST1P01037 141 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CCNA2P20248 432 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 NDUFS1P28331 727 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PIK3CGP48736 1102 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 NEDD8Q15843 81 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 UGT8Q16880 541 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 DUOXA1Q1HG43 343 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 UAP1L1Q3KQV9 507 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TTC23Q5W5X9 447 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OGFOD3Q6PK18 319 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ENPP7Q6UWV6 458 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 FAM83HQ6ZRV2 1179 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 TRAPPC5Q8IUR0 188 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 C8orf59Q8N0T1 100 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PARP8Q8N3A8 854 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OR5K2Q8NHB8 316 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 FBXL8Q96CD0 374 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CMTM7Q96FZ5 175 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PDXPQ96GD0 296 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 MENTQ9BUN1 341 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 SLC32A1Q9H598 525 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 KIR3DX1Q9H7L2 352 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PARVBQ9HBI1 364 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 IL1RAPQ9NPH3 570 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 SIRT5Q9NXA8 310 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 OPTCQ9UBM4 332 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 SLC23A2Q9UGH3 650 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 ERGIC3Q9Y282 383 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 PCDHGB2Q9Y5G2 931 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 HSPE1-MOB4S4R3N1 261 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 THADAQ6YHU6 1953 aa7.37□□□□□ -1.23
CDKL5-202ENST00000379996 CDC14CA4D256 554 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 FFAR3O14843 346 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 GPR42O15529 346 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 SERPINA1P01009 418 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 TFPTP0C1Z6 253 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 MVDP53602 400 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 CXCR4P61073 352 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 RPS3AP61247 264 aaKnown RBP7.36□□□□□ -1.23
CDKL5-202ENST00000379996 IFITM3Q01628 133 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 EMX1Q04741 257 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-202ENST00000379996 CHRNB3Q05901 458 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 ABHD18Q0P651 414 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 RAPSNQ13702 412 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 SPIDRQ14159 915 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 NR1D2Q14995 579 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 SYTL3Q4VX76 610 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 SYT6Q5T7P8 510 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-202ENST00000379996 FRA10AC1Q70Z53 315 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 ZDHHC13Q8IUH4 622 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 PIK3C3Q8NEB9 887 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 FBXO30Q8TB52 745 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 FIG4Q92562 907 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 APIPQ96GX9 242 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 C7orf34Q96L11 122 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 GABARAPL3Q9BY60 117 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 FBXO8Q9NRD0 319 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 EXO1Q9UQ84 846 aaKnown RBP7.36□□□□□ -1.23
CDKL5-202ENST00000379996 EIF3LQ9Y262 564 aaKnown RBP7.36□□□□□ -1.23
CDKL5-202ENST00000379996 INVSQ9Y283 1065 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 TMED5Q9Y3A6 229 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM131Q92545 1883 aa7.36□□□□□ -1.23
CDKL5-202ENST00000379996 KIR2DS5A0A0G2JLQ3 304 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms