RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TGIF2LXQ8IUE1 241 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TSPEARQ8WU66 669 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CNOT9Q92600 299 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 WNT2BQ93097 391 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 RAD9AQ99638 391 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AGO3Q9H9G7 860 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 VSX1Q9NZR4 365 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PISDQ9UG56 409 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 IGLV3-22A0A075B6J6 115 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MEIKINA0A087WXM9 373 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 A0A1B0GW55 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ICOSLGO75144 302 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SERPINA3P01011 423 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 GP1BAP07359 652 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 GCGRP47871 477 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 GNG10P50151 68 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AKR1C2P52895 323 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 RAB2AP61019 212 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AKR1C1Q04828 323 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 NTRK2Q16620 822 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MICBQ29980 383 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TEX30Q5JUR7 227 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 LIPKQ5VXJ0 399 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MFSD6LQ8IWD5 586 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PHACTR4Q8IZ21 702 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 LIX1Q8N485 282 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF614Q8N883 585 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CAMKVQ8NCB2 501 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CHST14Q8NCH0 376 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 OR1S1Q8NH92 325 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 C9orf43Q8TAL5 461 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PYURFQ96I23 114 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DMRTA2Q96SC8 542 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM209Q96SK2 561 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 XKR8Q9H6D3 395 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 HHATLQ9HCP6 504 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AP1M2Q9Y6Q5 423 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 A0A087X1B8 175 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 URADA6NGE7 173 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 WASH4PA8MWX3 477 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 GLUD1P00367 558 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MUC1P15941 1255 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CXCL2P19875 107 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SFNP31947 248 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 KCNJ10P78508 379 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SSPNQ14714 243 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SUPT20HL1Q3ZLR7 823 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ATP13A5Q4VNC0 1218 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 UNC50Q53HI1 259 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 GCNT6Q5T4J0 391 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRAMEF18Q5VWM3 479 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 RAET1GQ6H3X3 334 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ESRP1Q6NXG1 681 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PHYKPLQ8IUZ5 450 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 UBA3Q8TBC4 463 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM174Q8WUU8 243 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AP3S1Q92572 193 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 KAT2AQ92830 837 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CPNE4Q96A23 557 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF707Q96C28 371 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SCMH1Q96GD3 660 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRMT6Q96LA8 375 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SARGQ9BW04 601 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 NLNQ9BYT8 704 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SAP130Q9H0E3 1048 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRDM12Q9H4Q4 367 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 CRTAC1Q9NQ79 661 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 EIF2B3Q9NR50 452 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DCAF13Q9NV06 445 aaKnown RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 AIG1Q9NVV5 245 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 VAPAQ9P0L0 249 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 DHRS7Q9Y394 339 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF197O14709 1029 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 OR1I1O60431 355 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 PEX10O60683 326 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 HLA-DPA1P20036 260 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 FPR1P21462 350 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms