RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 MS4A6EQ96DS6 147 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 CAPZA3Q96KX2 299 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 SMR3AQ99954 134 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 COPS7BQ9H9Q2 264 aaPredicted RBP16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 SPRR3Q9UBC9 169 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 NCKAP5O14513 1909 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 TRGV5A0A0B4J1U4 118 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 A0A1B0GVC2 190 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 A6NNC1 897 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 C17orf105B2RV13 164 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 ZNF354AO60765 605 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM155BO75949 473 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 WDR47O94967 919 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 BMP5P22003 454 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 WNT3P56703 355 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 STX4Q12846 297 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 PRAMEF20Q5VT98 475 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 ZNF595Q8IYB9 648 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 NAT8LQ8N9F0 302 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 DAZLQ92904 295 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 JSRP1Q96MG2 331 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 ALPK1Q96QP1 1244 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 ALOXE3Q9BYJ1 711 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 DLL4Q9NR61 685 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 EDARQ9UNE0 448 aa16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 HRNRQ86YZ3 2850 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-202ENST00000379018 A0A088AWK7 358 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 CDC7O00311 574 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 LDB3O75112 727 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 H2AFYO75367 372 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 ENDOUP21128 410 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 ZNF10P21506 573 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 GDF5P43026 501 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 TRPC1P48995 793 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 LIM2P55344 173 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 RNF4P78317 190 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 LTBQ06643 244 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 ASPHQ12797 758 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 FLYWCH1Q4VC44 716 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 HP1BP3Q5SSJ5 553 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 TRIM40Q6P9F5 258 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 TMIGD1Q6UXZ0 262 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 FRA10AC1Q70Z53 315 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 RELL2Q8NC24 303 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 WFDC11Q8NEX6 87 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 OR14A16Q8NHC5 309 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 PTPMT1Q8WUK0 201 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 CFAP36Q96G28 342 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 NPLQ9BXD5 320 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 REXO4Q9GZR2 422 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 SLC6A15Q9H2J7 730 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 RPH3AQ9Y2J0 694 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 ATG4BQ9Y4P1 393 aa16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-202ENST00000379018 FREM3P0C091 2139 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 LRIT2A6NDA9 550 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 NCF1BA6NI72 391 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 NCF1CA8MVU1 366 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 SUSD5O60279 629 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 LRATO95237 230 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 C1GALT1C1LP0DN25 315 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 NCF1P14598 390 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 TACR1P25103 407 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 KCNJ2P63252 427 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 FOXO1Q12778 655 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 KEAP1Q14145 624 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 ZNF460Q14592 562 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 BBS9Q3SYG4 887 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 RIPPLY2Q5TAB7 128 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 ADNP2Q6IQ32 1131 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM45BPQ6NSW5 357 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 OPN5Q6U736 354 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 PAMR1Q6UXH9 720 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 PPIL6Q8IXY8 311 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 GOLM1Q8NBJ4 401 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 MORN4Q8NDC4 146 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM45AQ8TCE6 357 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 CERS2Q96G23 380 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 SGCZQ96LD1 299 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 QRFPRQ96P65 431 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 B4GALT7Q9UBV7 327 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 CBLCQ9ULV8 474 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 VWA7Q9Y334 891 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 NINQ8N4C6 2090 aa16.42■□□□□ 0.22
PDLIM4-202ENST00000379018 ANKDD1BA6NHY2 528 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM47E-STBD1D6RA91 191 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 CYR61O00622 381 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 CLGNO14967 610 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 RFPL3SP0C7P2 107 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 GABRA1P14867 456 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 MTTPP55157 894 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 PPP1R3AQ16821 1122 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 SPANXN3Q5MJ09 141 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 TAOK1Q7L7X3 1001 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 KRT78Q8N1N4 520 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms