RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 Q6ZVL8 140 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS36-201ENST00000378060 ABHD13Q7L211 337 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 GPRIN1Q7Z2K8 1008 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CHERPQ8IWX8 916 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 FATE1Q969F0 183 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ARNT2Q9HBZ2 717 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MSRAQ9UJ68 235 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 WDR45Q9Y484 360 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RBM7Q9Y580 266 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 MAGED1Q9Y5V3 778 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 CEP290O15078 2479 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 KMOO15229 486 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 FLRT2O43155 660 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PROM1O43490 865 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CSF2P04141 144 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 STSP08842 583 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CDK4P11802 303 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ACP5P13686 325 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 EDNRAP25101 427 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 OR1E2P47887 323 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MNX1P50219 401 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 RELAQ04206 551 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 TMEM115Q12893 351 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 GK3PQ14409 553 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LASP1Q14847 261 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 SEC23BQ15437 767 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 C4orf46Q504U0 113 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PNCKQ6P2M8 343 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 INO80EQ8NBZ0 244 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 TMIGD2Q96BF3 282 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 S100A16Q96FQ6 103 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 FEVQ99581 238 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 LHPPQ9H008 270 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC6A15Q9H2J7 730 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PLEKHA1Q9HB21 404 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 STOX2Q9P2F5 926 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 ZNF639Q9UID6 485 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ERVK-11Q9UQG0 969 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 UNC80Q8N2C7 3258 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 KANTRA0A1W2PQU2 76 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LRRN3E7EW58 273 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 J3QLW9 94 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC31A1O15431 190 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 BCAS1O75363 584 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 ADAP00813 363 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ZNF19P17023 458 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC6A6P31641 620 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC3A1Q07837 685 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 EIF4HQ15056 248 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 POMZP3Q6PJE2 187 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 GET4Q7L5D6 327 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 TMEM17Q86X19 198 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 TP53INP2Q8IXH6 220 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 NEIL3Q8TAT5 605 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 BPIFB1Q8TDL5 484 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 HERVK_113Q902F9 699 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SCGB3A2Q96PL1 93 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MCHR1Q99705 422 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 NPLQ9BXD5 320 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 LRRN3Q9H3W5 708 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 C12orf4Q9NQ89 552 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MTMR10Q9NXD2 777 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RDH8Q9NYR8 311 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RABL2AQ9UBK7 228 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 RABL2BQ9UNT1 228 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MAB21L2Q9Y586 359 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 EDDM13A0A1B0GTR0 161 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CLCA1A8K7I4 914 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ZNF670-ZNF695F2Z2N8 137 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 WRBO00258 174 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CH25HO95992 272 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 TFAP2AP05549 437 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 EN2P19622 333 aaPredicted RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 HNF1BP35680 557 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 PGGT1BP53609 377 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ERVPABLB-1P60509 514 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CXCR4P61073 352 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 KEAP1Q14145 624 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 EXOC3L2Q2M3D2 409 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 MINDY4Q4G0A6 757 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 RPL13AP3Q6NVV1 102 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 GALNT7Q86SF2 657 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 PAQR7Q86WK9 346 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 CNTN4Q8IWV2 1026 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ZNF527Q8NB42 609 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 ATP6V1C2Q8NEY4 427 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OR52E4Q8NGH9 312 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 SETD7Q8WTS6 366 aaKnown RBP8.05□□□□□ -1.12
VPS36-201ENST00000378060 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS36-201ENST00000378060 RFT1Q96AA3 541 aa8.05□□□□□ -1.12
VPS36-201ENST00000378060 OTUB2Q96DC9 234 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms