RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 H3BN98 237 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 SCO2O43819 266 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 CDRT1O95170 752 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 APOL3O95236 402 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 GSTM1P09488 218 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 DDOSTP39656 456 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 MAPK8P45983 427 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 TAS2R50P59544 299 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 CD83Q01151 205 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 POM121L1PQ3SYA9 428 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 FAM131AQ6UXB0 335 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 ABI3BPQ7Z7G0 1075 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 GLCCI1Q86VQ1 547 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 REV1Q9UBZ9 1251 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 A0A0B4J293 547 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 MANSC4A6NHS7 340 aaPredicted RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 SLCO2B1O94956 709 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 FURINP09958 794 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 GJA1P17302 382 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 PSMA1P25786 263 aaKnown RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 PTX3P26022 381 aaPredicted RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 SNRPD1P62314 119 aaKnown RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 ZNF763Q0D2J5 394 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 SPIN4Q56A73 249 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 CRB2Q5IJ48 1285 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 TOR1AIP1Q5JTV8 583 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 Q6ZVU0 165 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.17■□□□□ 0.34
GNE-201ENST00000377902 PPCDCQ96CD2 204 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 RNF31Q96EP0 1072 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 C19orf43Q9BQ61 176 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 BHLHE41Q9C0J9 482 aaPredicted RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 SPNS1Q9H2V7 528 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 TMEM88BA6NKF7 163 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 PRRG1O14668 218 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 PSIP1O75475 530 aaKnown RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 KLK1P06870 262 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 CSTF2P33240 577 aaKnown RBP eCLIP17.17■□□□□ 0.34
GNE-201ENST00000377902 HOMEZQ8IX15 550 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 TCEANCQ8N8B7 351 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 NECTIN4Q96NY8 510 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 C11orf54Q9H0W9 315 aaPredicted RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 MIXL1Q9H2W2 232 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 CFAP97Q9P2B7 532 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 GRIP1Q9Y3R0 1128 aa17.17■□□□□ 0.34
GNE-201ENST00000377902 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
GNE-201ENST00000377902 NPC1O15118 1278 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 HLA-FP30511 346 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 PTPN5P54829 565 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 PCBP3P57721 371 aaKnown RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 LSM11P83369 360 aaKnown RBP eCLIP17.16■□□□□ 0.34
GNE-201ENST00000377902 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 CAMK2BQ13554 666 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 VEPH1Q14D04 833 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 FLYWCH1Q4VC44 716 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 TNFAIP8L2Q6P589 184 aaPredicted RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 VN1R5Q7Z5H4 357 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 LSRQ86X29 649 aaPredicted RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 ZNF740Q8NDX6 193 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 GOT1L1Q8NHS2 421 aaPredicted RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 UBASH3BQ8TF42 649 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 RNF170Q96K19 258 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 TMEM38AQ9H6F2 299 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 RC3H2Q9HBD1 1191 aaKnown RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 ATP6V1HQ9UI12 483 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 CMAHPQ9Y471 501 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 DOCK6Q96HP0 2047 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 TPST2O60704 377 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 AP2A2O94973 939 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 IFNW1P05000 195 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 PCSK2P16519 638 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 PRKCAP17252 672 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 RHCEP18577 417 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 CAV3P56539 151 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 HNRNPA0Q13151 305 aaKnown RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 LARS2Q15031 903 aaKnown RBP17.16■□□□□ 0.34
GNE-201ENST00000377902 SYTL3Q4VX76 610 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 C22orf42Q6IC83 251 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 C22orf39Q6P5X5 142 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 TRIM40Q6P9F5 258 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 PAMR1Q6UXH9 720 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 SLCO4C1Q6ZQN7 724 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 ZNF438Q7Z4V0 828 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 NPAS4Q8IUM7 802 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 OXR1Q8N573 874 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 OR9Q1Q8NGQ5 310 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 C16orf78Q8WTQ4 265 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 TMEM80Q96HE8 168 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 CARD8Q9Y2G2 431 aa17.16■□□□□ 0.34
GNE-201ENST00000377902 A0A1W2PQL4 384 aaPredicted RBP17.15■□□□□ 0.34
GNE-201ENST00000377902 ZNF670-ZNF695F2Z2N8 137 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 OR10H3O60404 316 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 GPR37L1O60883 481 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 ABLIM3O94929 683 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 CSF3P09919 207 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 MSL3P1P0C860 447 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 RHAGQ02094 409 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 ZNF91Q05481 1191 aa17.15■□□□□ 0.34
GNE-201ENST00000377902 MED27Q6P2C8 311 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms