RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.16□□□□□ -0.625e-39■■■■■ 49.2
DDR1-227ENST00000376570 C16orf78Q8WTQ4 265 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SLC29A3Q9BZD2 475 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 REEP4Q9H6H4 257 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CD93Q9NPY3 652 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 EDDM13A0A1B0GTR0 161 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 A0A1W2PPK0 400 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 YY2O15391 372 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 AIREO43918 545 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 PRMT3O60678 531 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 B4GALT2O60909 372 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 C1orf105O95561 183 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 NTN1O95631 604 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 P2RY2P41231 377 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 ASMTP46597 345 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 TXNL4AP83876 142 aaKnown RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 TFF2Q03403 129 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 TAP2Q03519 686 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 ZXDCQ2QGD7 858 aaPredicted RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 MINDY4Q4G0A6 757 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 SFTPA2Q8IWL1 248 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 AMER3Q8N944 861 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 ADAMTS15Q8TE58 950 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 USP7Q93009 1102 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 Q96MT0 163 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 PAK6Q9NQU5 681 aaPredicted RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 ARMC1Q9NVT9 282 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 TTC28Q96AY4 2481 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 ANHXE9PGG2 379 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 UGT2B17O75795 530 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 CERS1P27544 350 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 COPZ1P61923 177 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 SLAMF1Q13291 335 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 ERV3-1Q14264 604 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 CST6Q15828 149 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 CTU2Q2VPK5 515 aaKnown RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 Q6ZNB5 142 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 DNASE1L2Q92874 299 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.62
DDR1-227ENST00000376570 TRIOO75962 3097 aa11.15□□□□□ -0.62
DDR1-227ENST00000376570 DYTNA2CJ06 578 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 ZNF99A8MXY4 864 aaPredicted RBP11.15□□□□□ -0.63
DDR1-227ENST00000376570 OR10H2O60403 315 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 GNRH1P01148 92 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 KELP23276 732 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 DNAJA1P31689 397 aaKnown RBP11.15□□□□□ -0.63
DDR1-227ENST00000376570 GJA4P35212 333 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 RCVRNP35243 200 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 ZNF846Q147U1 533 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 SPCS2Q15005 226 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 RGNQ15493 299 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 WSCD2Q2TBF2 565 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 FIGNL1Q6PIW4 674 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 ZNF783Q6ZMS7 281 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 C16orf58Q96GQ5 468 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 ALPK1Q96QP1 1244 aa11.15□□□□□ -0.63
DDR1-227ENST00000376570 MYL12BO14950 172 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 AREL1O15033 823 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 SCAMP2O15127 329 aaKnown RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 IFNA14P01570 189 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 GSTT2BP0CG30 244 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 PORP16435 677 aaPredicted RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 ZNF12P17014 697 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 NR4A2P43354 598 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 CCR8P51685 355 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 CDC42P60953 191 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 TUBA4AP68366 448 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 PCDH1Q08174 1060 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 APOFQ13790 326 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 HNRNPA1L2Q32P51 320 aaKnown RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 DCST1Q5T197 706 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 NXPE4Q6UWF7 544 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 C6orf120Q7Z4R8 191 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 ABHD11Q8NFV4 315 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 OR8J3Q8NGG0 315 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 OR51L1Q8NGJ5 315 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 ZFP90Q8TF47 636 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 DTD2Q96FN9 168 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 TMEM19Q96HH6 336 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 DCAF13Q9NV06 445 aaKnown RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 C14orf119Q9NWQ9 140 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 RIMKLBQ9ULI2 386 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 ZNF232Q9UNY5 417 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 PCDHB11Q9Y5F2 797 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 A0A1B0GVC2 190 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 A0A1W2PS29 197 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 A6NIN4 97 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 WWP2O00308 870 aa11.14□□□□□ -0.63
DDR1-227ENST00000376570 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
DDR1-227ENST00000376570 AP2A2O94973 939 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms