RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 TPRG1Q6ZUI0 275 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 SHFQ7M4L6 423 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 CARM1Q86X55 608 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 SORCS1Q8WY21 1168 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
COL4A1-201ENST00000375820 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 GJB5O95377 273 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 OAS1P00973 400 aaKnown RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 FESP07332 822 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ZNF182P17025 639 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SCGB1C1Q8TD33 95 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 POT1Q9NUX5 634 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 HSD3B1P14060 373 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CYP1B1Q16678 543 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 EXOC3L2Q2M3D2 409 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 FIGNL1Q6PIW4 674 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SLC35B2Q8TB61 432 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ZNF675Q8TD23 568 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 RBP7Q96R05 134 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CIB4A0PJX0 185 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 YY2O15391 372 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 TSPAN6O43657 245 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 MAFKO60675 156 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SDC3O75056 442 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 C8BP07358 591 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 IL3P08700 152 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CD72P21854 359 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 PTGR1Q14914 329 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 USP53Q70EK8 1073 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 DPY19L4Q7Z388 723 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 OSTF1Q92882 214 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 AP1S3Q96PC3 154 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ATRNO75882 1429 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 LSSP48449 732 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ZXDBP98169 803 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 VMACQ2NL98 169 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CPT1CQ8TCG5 803 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ZNF599Q96NL3 588 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 EPHA6Q9UF33 1036 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ZNF850A8MQ14 1090 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 FLRT2O43155 660 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SNAP29O95721 258 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 GPR4P46093 362 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 GRB7Q14451 532 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 MFSD13AQ14CX5 517 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 C18orf21Q32NC0 220 aaPredicted RBP13.19□□□□□ -0.3
COL4A1-201ENST00000375820 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ATAD3CQ5T2N8 411 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 C22orf42Q6IC83 251 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 KLHDC7BQ96G42 594 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 SMOQ99835 787 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 DERL2Q9GZP9 239 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 OR51B6Q9H340 312 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CD320Q9NPF0 282 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 INSL5Q9Y5Q6 135 aa13.19□□□□□ -0.3
COL4A1-201ENST00000375820 CBSLP0DN79 551 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-201ENST00000375820 AKR1C4P17516 323 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 CBSP35520 551 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 HNF1BP35680 557 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 POU3F4P49335 361 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 NIPAL4Q0D2K0 466 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 SLAMF1Q13291 335 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 TMEM151BQ8IW70 566 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 SH3BGRL2Q9UJC5 107 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 ACSL6Q9UKU0 697 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 B3GALT1Q9Y5Z6 326 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 FARS2O95363 451 aaKnown RBP13.18□□□□□ -0.3
COL4A1-201ENST00000375820 AK4P27144 223 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-201ENST00000375820 DEFB134Q4QY38 66 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 FOXR2Q6PJQ5 311 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 CEACAM19Q7Z692 300 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 TMEM130Q8N3G9 435 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
COL4A1-201ENST00000375820 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-201ENST00000375820 MSANTD3Q96H12 275 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 TAS2R3Q9NYW6 316 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 A6NCN8 305 aa13.18□□□□□ -0.3
COL4A1-201ENST00000375820 SLC22A2O15244 555 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms