RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FAM71E1Q6IPT2 247 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 ANGPTL8Q6UXH0 198 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 FAM129CQ86XR2 697 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 NLGN4XQ8N0W4 816 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 PHF10Q8WUB8 498 aaKnown RBP13.35□□□□□ -0.27
MSH5-202ENST00000375740 UBE2E3Q969T4 207 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 PPCDCQ96CD2 204 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 YIPF6Q96EC8 236 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 KXD1Q9BQD3 176 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 MYNNQ9NPC7 610 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 GPATCH2Q9NW75 528 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 SERGEFQ9UGK8 458 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 RAPGEFL1Q9UHV5 662 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 ORC6Q9Y5N6 252 aa13.35□□□□□ -0.27
MSH5-202ENST00000375740 A8MV72 311 aaPredicted RBP13.34□□□□□ -0.27
MSH5-202ENST00000375740 SCO2O43819 266 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 CRATP43155 626 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 MASP1P48740 699 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 ARHGDIAP52565 204 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 LRRC74AQ0VAA2 488 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 GATAD2AQ86YP4 633 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 CCDC103Q8IW40 242 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 GOT1L1Q8NHS2 421 aaPredicted RBP13.34□□□□□ -0.27
MSH5-202ENST00000375740 TAC3Q9UHF0 121 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 NAALAD2Q9Y3Q0 740 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 OR1A2Q9Y585 309 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 AP3D1O14617 1153 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 GPR37L1O60883 481 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 GCM2O75603 506 aaPredicted RBP13.34□□□□□ -0.27
MSH5-202ENST00000375740 ETFAP13804 333 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 PSMB9P28065 219 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 DAPP51397 102 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 MVDP53602 400 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 PDE7AQ13946 482 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 SHHQ15465 462 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 CCBE1Q6UXH8 406 aaPredicted RBP13.34□□□□□ -0.27
MSH5-202ENST00000375740 KRT78Q8N1N4 520 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 HDDC3Q8N4P3 179 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 OR5K2Q8NHB8 316 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 RORBQ92753 470 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 KLK6Q92876 244 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 LGALS12Q96DT0 336 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 SLC35A5Q9BS91 424 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 RSPH9Q9H1X1 276 aaPredicted RBP13.34□□□□□ -0.27
MSH5-202ENST00000375740 PLSCR3Q9NRY6 295 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 QPCTLQ9NXS2 382 aa13.34□□□□□ -0.27
MSH5-202ENST00000375740 CDH23Q9H251 3354 aa13.33□□□□□ -0.27
MSH5-202ENST00000375740 A0A1W2PP55 124 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 SLC16A6O15403 523 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 PAK4O96013 591 aaPredicted RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 APODP05090 189 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 IGFBP5P24593 272 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 DNAJA1P31689 397 aaKnown RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 GABARAPL2P60520 117 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 IL1RL1Q01638 556 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 RFX4Q33E94 735 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 ZC3H12BQ5HYM0 836 aaKnown RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 SNAP47Q5SQN1 464 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 ZNF691Q5VV52 312 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 C17orf64Q86WR6 236 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 HORMAD1Q86X24 394 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 MMP21Q8N119 569 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 OXR1Q8N573 874 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 MCFD2Q8NI22 146 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 TEX101Q9BY14 249 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 GABARAPL1Q9H0R8 117 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 NECTIN3Q9NQS3 549 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 DZANK1Q9NVP4 752 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 CARD8Q9Y2G2 431 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 M0QX08 132 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 CCRL2O00421 344 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 SUV39H1O43463 412 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 IL3P08700 152 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 ERGP11308 486 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 ENDOUP21128 410 aaKnown RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 PCGF2P35227 344 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 SERPINB10P48595 397 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 KCNJ10P78508 379 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 IQCCQ4KMZ1 466 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 SLC9B2Q86UD5 537 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 LACC1Q8IV20 430 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 C11orf65Q8NCR3 313 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 C7orf34Q96L11 122 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 MYADMQ96S97 322 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 CUEDC1Q9NWM3 386 aaPredicted RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 ADPRHL2Q9NX46 363 aa13.33□□□□□ -0.28
MSH5-202ENST00000375740 PDP1Q9P0J1 537 aaPredicted RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 DNMT3AQ9Y6K1 912 aaPredicted RBP13.33□□□□□ -0.28
MSH5-202ENST00000375740 TMEM229AB2RXF0 380 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 KMOO15229 486 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 LINC01565O15544 149 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 FPR1P21462 350 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms