RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SCARB2Q14108 478 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PLCL1Q15111 1095 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TJAP1Q5JTD0 557 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NDUFAF5Q5TEU4 345 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR2T5Q6IEZ7 315 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 VN1R4Q7Z5H5 301 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 VTCN1Q7Z7D3 282 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR10Q1Q8NGQ4 319 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR2T29Q8NH02 315 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZFP28Q8NHY6 868 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CYGBQ8WWM9 190 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 HLA-CQ95604 372 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TCEAL2Q9H3H9 227 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CXorf56Q9H5V9 222 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CAAP1Q9H8G2 361 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZSCAN32Q9NX65 697 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 APOBEC3BQ9UH17 382 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ABCG2Q9UNQ0 655 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MYRFQ9Y2G1 1151 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 A0A0G2JN53 185 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM229AB2RXF0 380 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 VIPP01282 170 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RXRGP48443 463 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PRIM2P49643 509 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ITGA1P56199 1179 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 VLDLRP98155 873 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CDK6Q00534 326 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RELAQ04206 551 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLAMF1Q13291 335 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 IQCCQ4KMZ1 466 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM179BQ7Z7N9 219 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PATL1Q86TB9 770 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 GAL3ST3Q96A11 431 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 EXOSC8Q96B26 276 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RMND5BQ96G75 393 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 DOHHQ9BU89 302 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ACTR10Q9NZ32 417 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CPNE7Q9UBL6 633 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PADI2Q9Y2J8 665 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MAP4K5Q9Y4K4 846 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ENTPD2Q9Y5L3 495 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MAGED1Q9Y5V3 778 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CCDC88CQ9P219 2028 aa17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TRBV23OR9-2A0A075B6M9 112 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 E2F6O75461 281 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 BLKP51451 505 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PCBP3P57721 371 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 DSTNP60981 165 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SELENOWP63302 87 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KCNJ10P78508 379 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KCTD21Q4G0X4 260 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 LIN52Q52LA3 116 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CRB2Q5IJ48 1285 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RNF220Q5VTB9 566 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SPESP1Q6UW49 350 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ASPGQ86U10 573 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 DCP2Q8IU60 420 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NFKBIDQ8NI38 313 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TM4SF19Q96DZ7 209 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 THAP11Q96EK4 314 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NRBF2Q96F24 287 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 C7orf34Q96L11 122 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 EPB41L1Q9H4G0 881 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC35C2Q9NQQ7 365 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 LYARQ9NX58 379 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 VNN3Q9NY84 501 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 C5AR2Q9P296 337 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ANGPT4Q9Y264 503 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 VGLL3A8MV65 326 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CLPTM1O96005 669 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 STATHP02808 62 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RPL5P46777 297 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RGS1Q08116 209 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RFX4Q33E94 735 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FOXB2Q5VYV0 432 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PARGQ86W56 976 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KLHDC7BQ96G42 594 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FBXL20Q96IG2 436 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MACROD1Q9BQ69 325 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PCED1AQ9H1Q7 454 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 A4GALTQ9NPC4 353 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 BAG5Q9UL15 447 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SNX8Q9Y5X2 465 aa17.07■□□□□ 0.32
HLA-DQB1-201ENST00000374943 A0A1W2PR48 441 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 OR6C74A6NCV1 312 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TRIM64A6NGJ6 449 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MAP3K13O43283 966 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 IFNA14P01570 189 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PABPC4LP0CB38 370 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MAGP20916 626 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FPR1P21462 350 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 DNAJA1P31689 397 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MAGEA8P43361 318 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CDK9P50750 372 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms