RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MYBPHQ13203 477 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SNX1Q13596 522 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 HNRNPDQ14103 355 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 IHHQ14623 411 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 RPS6KA1Q15418 735 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 KCTD19Q17RG1 926 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SEL1L3Q68CR1 1132 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 KLHL24Q6TFL4 600 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 KDM7AQ6ZMT4 941 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 LRRC49Q8IUZ0 686 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SFTPA2Q8IWL1 248 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 TEX26Q8N6G2 289 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 CADM4Q8NFZ8 388 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 TRIM58Q8NG06 486 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 TFB1MQ8WVM0 346 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 RAB40AQ8WXH6 277 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 FAM131CQ96AQ9 280 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 COG8Q96MW5 612 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 TSGA13Q96PP4 275 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SMIM14Q96QK8 99 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 IL12RB2Q99665 862 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 POLR1EQ9GZS1 481 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 EBF2Q9HAK2 575 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 KLHL8Q9P2G9 620 aaPredicted RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 PILRBQ9UKJ0 227 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 PAM16Q9Y3D7 125 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 FADS3Q9Y5Q0 445 aa4.27□□□□□ -1.73
PMS1-202ENST00000374826 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 TPRP12270 2363 aaKnown RBP4.27□□□□□ -1.73
PMS1-202ENST00000374826 SEC16AO15027 2179 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 MAP1BP46821 2468 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 LNP1A1A4G5 178 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 GOLGA6L9A6NEM1 432 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 IGLON5A6NGN9 336 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 NPIPB15A6NHN6 443 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 HACD1B0YJ81 288 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 EBAG9O00559 213 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 TRAFD1O14545 582 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 RAD51BO15315 384 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 BCAT2O15382 392 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 KCNN4O15554 427 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 LATO43561 262 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 KIF5CO60282 957 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CEP104O60308 925 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PGLSO95336 258 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 MT-CYBP00156 380 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 FGGP02679 453 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 MMP2P08253 660 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SERPINF2P08697 491 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ALPIP09923 528 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PIRTP0C851 137 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 TFPIP10646 304 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CD27P26842 260 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PSMB4P28070 264 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CSNK1EP49674 416 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 CCR5P51681 352 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ARL4CP56559 192 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CLDN2P57739 230 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 GNG11P61952 73 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 IRX4P78413 519 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ELP6Q0PNE2 266 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 WASHC5Q12768 1159 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 RALGDSQ12967 914 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 GRIK2Q13002 908 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SNTA1Q13424 505 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 XRCC4Q13426 336 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 OLIG2Q13516 323 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SF3B4Q15427 424 aaKnown RBP eCLIP4.26□□□□□ -1.73
PMS1-202ENST00000374826 UGP2Q16851 508 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ZNF718Q3SXZ3 478 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 FAM76BQ5HYJ3 339 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 WDR45BQ5MNZ6 344 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ARMC12Q5T9G4 340 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 WBP2NLQ6ICG8 309 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 BRAT1Q6PJG6 821 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 NEK10Q6ZWH5 1172 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 BZW1Q7L1Q6 419 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 PRSS45Q7RTY3 260 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PTAR1Q7Z6K3 402 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 PRUNE1Q86TP1 453 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 TSPAN33Q86UF1 283 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 TRIM69Q86WT6 500 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 HORMAD1Q86X24 394 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SLC13A5Q86YT5 568 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CDKL3Q8IVW4 592 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 ZNF567Q8N184 647 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 LPCAT1Q8NF37 534 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 IPMKQ8NFU5 416 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SPATA22Q8NHS9 363 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 RFWD2Q8NHY2 731 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ARRDC2Q8TBH0 407 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CCDC110Q8TBZ0 833 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms