RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CNR1P21554 472 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 MAGEA5P43359 124 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 MTTPP55157 894 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 TAS2R39P59534 338 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 FOXO1Q12778 655 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 MYBPHQ13203 477 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.37
CXCL12-202ENST00000374426 NDUFAF5Q5TEU4 345 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 PRAMEF9Q5VWM5 478 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF585AQ6P3V2 769 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 ABHD17CQ6PCB6 329 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 B3GNT6Q6ZMB0 384 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 RTL4Q6ZR62 310 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 ADAMTSL2Q86TH1 951 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 CLYBLQ8N0X4 340 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 MORN4Q8NDC4 146 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 DAZLQ92904 295 aaKnown RBP12.77□□□□□ -0.37
CXCL12-202ENST00000374426 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 POM121Q96HA1 1249 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 SERINC2Q96SA4 455 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 ALOXE3Q9BYJ1 711 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 OR8D2Q9GZM6 311 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 IL1RL2Q9HB29 575 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 CTNNAL1Q9UBT7 734 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 EML6Q6ZMW3 1958 aa12.77□□□□□ -0.37
CXCL12-202ENST00000374426 A0A0G2JNJ9 132 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 SYNDIG1LA6NDD5 238 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 ANKDD1BA6NHY2 528 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 NCF1BA6NI72 391 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 NCF1CA8MVU1 366 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 NCF1P14598 390 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 ADH7P40394 386 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 IST1P53990 364 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 DLX5P56178 289 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 RNF4P78317 190 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 MORF4L2Q15014 288 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 EFTUD2Q15029 972 aaKnown RBP eCLIP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 TGFBIQ15582 683 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 HYAL4Q2M3T9 481 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 FRA10AC1Q70Z53 315 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 LIX1LQ8IVB5 337 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 GOLM1Q8NBJ4 401 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 OR8K3Q8NH51 312 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 OR14A16Q8NHC5 309 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 LRRC39Q96DD0 335 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 SGCZQ96LD1 299 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 F2RL3Q96RI0 385 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 TMEM79Q9BSE2 394 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 PITHD1Q9GZP4 211 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 PRDM7Q9NQW5 492 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 Q9UFV3 132 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF490Q9ULM2 529 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-202ENST00000374426 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
CXCL12-202ENST00000374426 ATP6AP2A0A1C7CYW4 349 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 C17orf105B2RV13 164 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 AQP7O14520 342 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 TAPBPO15533 448 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 SUSD5O60279 629 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 LDB3O75112 727 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 ATP6AP2O75787 350 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 ZWINTO95229 277 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CCL3P10147 92 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CD22P20273 847 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 HPDP32754 393 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-202ENST00000374426 GGT5P36269 586 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 ZFP36L2P47974 494 aaKnown RBP12.75□□□□□ -0.37
CXCL12-202ENST00000374426 MGAT5Q09328 741 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 STX4Q12846 297 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 RCN2Q14257 317 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 FBXO48Q5FWF7 155 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 FAM47EQ6ZV65 393 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 UBE3DQ7Z6J8 389 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CAPZA3Q96KX2 299 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 MCMBPQ9BTE3 642 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 COPS7BQ9H9Q2 264 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-202ENST00000374426 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-202ENST00000374426 SACM1LQ9NTJ5 587 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 TUBA8Q9NY65 449 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-202ENST00000374426 MOCS1Q9NZB8 636 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 GPRC5BQ9NZH0 403 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 ACAD8Q9UKU7 415 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 SNX12Q9UMY4 172 aa12.75□□□□□ -0.37
CXCL12-202ENST00000374426 CES2O00748 559 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 CTAG2O75638 210 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 WISP3O95389 354 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-202ENST00000374426 NADKO95544 446 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms