RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 EXD2Q9NVH0 621 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 CLEC1BQ9P126 229 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 P2RX2Q9UBL9 471 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC23A2Q9UGH3 650 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ZFR2Q9UPR6 939 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 SPACA6W5XKT8 324 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A1W2PQF6 199 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRSS38A1L453 326 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SYNDIG1LA6NDD5 238 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PDZK1P1A8MUH7 402 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 GRXCR1A8MXD5 290 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 C10orf142B7Z368 130 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 E9PQ18 207 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TNFRSF11BO00300 401 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SYT5O00445 386 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF217O75362 1048 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SEC14L2O76054 403 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 C6orf47O95873 294 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC35G6P0C7Q6 338 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ACP5P13686 325 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 F3P13726 295 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 HIST1H1TP22492 207 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 IFNGR2P38484 337 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 BUD31P41223 144 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SSR2P43308 183 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KHKP50053 298 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 DGKEP52429 567 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 METAP1P53582 386 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CRISP3P54108 245 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR20EP86478 221 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR20CP86479 221 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR20DP86480 221 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR20BP86481 221 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR20AP86496 221 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PLIN5Q00G26 463 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ILF3Q12906 894 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 NPRL3Q12980 569 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TSTA3Q13630 321 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC5A12Q1EHB4 618 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 GTDC1Q4AE62 458 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 IQCCQ4KMZ1 466 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 C2orf27AQ580R0 203 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 COLEC12Q5KU26 742 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 AP1ARQ63HQ0 302 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MRM1Q6IN84 353 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF425Q6IV72 752 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KLHL35Q6PF15 583 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TRIM74Q86UV6 250 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CLECL1Q8IZS7 167 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TTC29Q8NA56 475 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ATG16L2Q8NAA4 619 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CAMKVQ8NCB2 501 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 OR2L3Q8NG85 312 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 OR13F1Q8NGS4 319 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 C9orf43Q8TAL5 461 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 LCN9Q8WX39 176 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 PROX1Q92786 737 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MYDGFQ969H8 173 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CHFRQ96EP1 664 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MSLNLQ96KJ4 702 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF354BQ96LW1 612 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 NODALQ96S42 347 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KXD1Q9BQD3 176 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 LGR4Q9BXB1 951 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF717Q9BY31 904 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CHRDQ9H2X0 955 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CACYBPQ9HB71 228 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC35C2Q9NQQ7 365 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MBNL1Q9NR56 388 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 GIN1Q9NXP7 522 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 NTMQ9P121 344 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TAAR2Q9P1P5 351 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KLF15Q9UIH9 416 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TMEFF2Q9UIK5 374 aaPredicted RBP8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 KCND3Q9UK17 655 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 FBXL21Q9UKT6 434 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 TMCC3Q9ULS5 477 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MMP17Q9ULZ9 603 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 MGAT4BQ9UQ53 548 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ENTPD4Q9Y227 616 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC9A8Q9Y2E8 581 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 BTBD3Q9Y2F9 522 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 GMPPBQ9Y5P6 360 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ENPP4Q9Y6X5 453 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 C2orf16Q68DN1 1984 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 ANKRD12Q6UB98 2062 aa8.29□□□□□ -1.08
SNRNP40-202ENST00000373720 IRGMA1A4Y4 181 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 SNTNA6NMZ2 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms