RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 PRAMEF2O60811 474 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SH3BGRLO75368 114 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 MYO1DO94832 1006 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SHBGP04278 402 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 ARL1P40616 181 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SERTAD2Q14140 314 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 ELAVL1Q15717 326 aaKnown RBP14.91□□□□□ -0.02
HDAC8-208ENST00000373583 FRG2Q64ET8 278 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 FCRLBQ6BAA4 426 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 FAM180AQ6UWF9 173 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 KIF2BQ8N4N8 673 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 MDS2Q8NDY4 140 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SUN3Q8TAQ9 357 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 GRHL3Q8TE85 626 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 FRG2BQ96QU4 278 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SERPINI1Q99574 410 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDAC8-208ENST00000373583 DDX31Q9H8H2 851 aaKnown RBP14.91□□□□□ -0.02
HDAC8-208ENST00000373583 PRM3Q9NNZ6 103 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 SEMA4BQ9NPR2 832 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-208ENST00000373583 TBK1Q9UHD2 729 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 DOPEY2Q9Y3R5 2298 aa14.91□□□□□ -0.02
HDAC8-208ENST00000373583 A0A0A6YYD5 115 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 GOLGA8RI6L899 631 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 GLRA3O75311 464 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 CBX6O95503 412 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 ETHE1O95571 254 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 PYGBP11216 843 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 CPN2P22792 545 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 ATP5F1P24539 256 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 PPP2R1BP30154 601 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 BSGP35613 385 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 CLCN2P51788 898 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 GPR143P51810 404 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 IGLV3-21P80748 117 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 TNFRSF17Q02223 184 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SRSF1Q07955 248 aaKnown RBP eCLIP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SLAMF1Q13291 335 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 TUBA3CQ13748 450 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 NR6A1Q15406 480 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 MRM1Q6IN84 353 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 TUBA3EQ6PEY2 450 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 CLNKQ7Z7G1 428 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 RPS19BP1Q86WX3 136 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 NUDT13Q86X67 352 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SLC22A9Q8IVM8 553 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 FAM26EQ8N5C1 309 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 ST6GALNAC3Q8NDV1 305 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 OR4F6Q8NGB9 312 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 FAR1Q8WVX9 515 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 TMEM237Q96Q45 408 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SLX1AQ9BQ83 275 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 UTP23Q9BRU9 249 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SORBS1Q9BX66 1292 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 PNO1Q9NRX1 252 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 LYARQ9NX58 379 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 VTI1BQ9UEU0 232 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 TRPS1Q9UHF7 1281 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 DCDC2Q9UHG0 476 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 ZGRF1Q86YA3 2104 aa14.9□□□□□ -0.02
HDAC8-208ENST00000373583 FLNBO75369 2602 aaKnown RBP14.9□□□□□ -0.02
HDAC8-208ENST00000373583 SETXQ7Z333 2677 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 SVILO95425 2214 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 GABRR3A8MPY1 467 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 A8MUA0 341 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 MAN1A2O60476 641 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 DLX3O60479 287 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 F10P00742 488 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 NEK2P51955 445 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 HNRNPH2P55795 449 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 MLF1P58340 268 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 CLCQ05315 142 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 STX4Q12846 297 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 IFT88Q13099 833 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 MRPL49Q13405 166 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 UBAP2LQ14157 1087 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 ZNF678Q5SXM1 525 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 ZNF324BQ6AW86 544 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 LETMD1Q6P1Q0 360 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 SH2D5Q6ZV89 423 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 RPS27LQ71UM5 84 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 MILR1Q7Z6M3 343 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 GPR180Q86V85 440 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 TMEM132CQ8N3T6 1108 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 BCORP1Q8N888 145 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 MORN4Q8NDC4 146 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 OR14A16Q8NHC5 309 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 DAZLQ92904 295 aaKnown RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 L3HYPDHQ96EM0 354 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 ALOXE3Q9BYJ1 711 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 TRIM45Q9H8W5 580 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 ZNF223Q9UK11 482 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-208ENST00000373583 FBXW2Q9UKT8 454 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 STK38LQ9Y2H1 464 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 POLEQ07864 2286 aa14.89□□□□□ -0.03
HDAC8-208ENST00000373583 TRBV11-1A0A0K0K1C0 115 aa14.88□□□□□ -0.03
HDAC8-208ENST00000373583 A0A1B0GTL3 188 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms