RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CREB3L4Q8TEY5 395 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 GAL3ST3Q96A11 431 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 TMEM125Q96AQ2 219 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 WDR34Q96EX3 536 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 PEX11GQ96HA9 241 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 RBCK1Q9BYM8 510 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 ANKDD1BA6NHY2 528 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 K7EPI3 171 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 IGFBP2P18065 325 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 JAK1P23458 1154 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 CYB561P49447 251 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 OR4D2P58180 307 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 SLC26A5P58743 744 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 OLR1P78380 273 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 RHAGQ02094 409 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 HYAL2Q12891 473 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 DOC2AQ14183 400 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 TMEM211Q6ICI0 200 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 POGLUT1Q8NBL1 392 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 FAM57AQ8TBR7 257 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 DCAKDQ8WVC6 231 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 ASB5Q8WWX0 329 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 ISL2Q96A47 359 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 CLK4Q9HAZ1 481 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 PRM3Q9NNZ6 103 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 TNFRSF10DQ9UBN6 386 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 ANGPTL3Q9Y5C1 460 aa17.92■□□□□ 0.46
TRAPPC3-204ENST00000373166 SCN3AQ9NY46 2000 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 A0A088AWK7 358 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 MAGEB17A8MXT2 336 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 CHST10O43529 356 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 CLEC3AO75596 197 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 CDC123O75794 336 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 B3GALT4O96024 378 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 TPOP07202 933 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 ZNF10P21506 573 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 PTGER1P34995 402 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 MAGEA12P43365 314 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 CHIT1Q13231 466 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 SETDB1Q15047 1291 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 TBCCQ15814 346 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 ZNF468Q5VIY5 522 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 LILRB4Q8NHJ6 448 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 ELP5Q8TE02 316 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 TBC1D20Q96BZ9 403 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 FAR2Q96K12 515 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 KLHL31Q9H511 634 aa17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 CPSF2Q9P2I0 782 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-204ENST00000373166 NIPBLQ6KC79 2804 aaeCLIP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 CACNA1CQ13936 2221 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 A0A1B0GTH9 108 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TRIM49D1C9J1S8 452 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 PSMD12O00232 456 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TFECO14948 347 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 RIPK2O43353 540 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 ERI3O43414 337 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 PRAMEF4O60810 478 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 FHP07954 510 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 MTHFD2P13995 350 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 CD99P14209 185 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 EPB42P16452 691 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 EPORP19235 508 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TPP2P29144 1249 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 CHRNB4P30926 498 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 ALDH18A1P54886 795 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 PFKFB4Q16877 469 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TSNAXIP1Q2TAA8 658 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TECRLQ5HYJ1 363 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TEX35Q5T0J7 233 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 LGSNQ5TDP6 509 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 PRAMEF9Q5VWM5 478 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 CD163Q86VB7 1156 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 LRRN4CLQ8ND94 238 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 UBE2E3Q969T4 207 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 GPR78Q96P69 363 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 ZNF559Q9BR84 538 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 TRIM45Q9H8W5 580 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 KCNJ16Q9NPI9 418 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 LANCL2Q9NS86 450 aa17.9■□□□□ 0.46
TRAPPC3-204ENST00000373166 C4orf51C9J302 202 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 SNRPAP09012 282 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 RBP1P09455 135 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 SMIM10L1P0DMW3 83 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 COL6A2P12110 1019 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 RNH1P13489 461 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 CD22P20273 847 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 HNRNPH1P31943 449 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 CASP2P42575 452 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 BTN3A2P78410 334 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 TGM3Q08188 693 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 TRIM40Q6P9F5 258 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 TMEM200AQ86VY9 491 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 KIF2BQ8N4N8 673 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 TEX9Q8N6V9 391 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 RND1Q92730 232 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 TSLPQ969D9 159 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 MS4A6EQ96DS6 147 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 SMIM10Q96HG1 83 aa17.89■□□□□ 0.45
TRAPPC3-204ENST00000373166 SCYL1Q96KG9 808 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms