RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PCDHA9Q9Y5H5 950 aa14.96□□□□□ -0.01
TMEM53-204ENST00000372243 DYTNA2CJ06 578 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 FAM234BA2RU67 622 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 CAPN14A8MX76 684 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 MEN1O00255 615 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 NVLO15381 856 aaKnown RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 AIFM1O95831 613 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 KLK3P07288 261 aaPredicted RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 NR2F6P10588 404 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 PIK3R1P27986 724 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 IL12AP29459 219 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 ZFP36L2P47974 494 aaKnown RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 NME5P56597 212 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 UGT8Q16880 541 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 NKAIN1Q4KMZ8 207 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 C1orf189Q5VU69 101 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 FOXR1Q6PIV2 292 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 BLOC1S3Q6QNY0 202 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 ZNF517Q6ZMY9 492 aaPredicted RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 METTL27Q8N6F8 245 aaPredicted RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 KRTCAP2Q8N6L1 136 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 OR9I1Q8NGQ6 314 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 OR51Q1Q8NH59 317 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 COL26A1Q96A83 441 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 OR1F2PQ96R84 312 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 MKKSQ9NPJ1 570 aaPredicted RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 MIEF1Q9NQG6 463 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 HCN3Q9P1Z3 774 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 MRPS33Q9Y291 106 aaKnown RBP14.95□□□□□ -0.02
TMEM53-204ENST00000372243 MAU2Q9Y6X3 613 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 KNTC1P50748 2209 aa14.95□□□□□ -0.02
TMEM53-204ENST00000372243 IGLV3-12A0A075B6K2 115 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 GABRR3A8MPY1 467 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 AKAP10O43572 662 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 STK17BO94768 372 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TNFSF15O95150 251 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 LRATO95237 230 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 DLGAP3O95886 979 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 IL6P05231 212 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 AGXTP21549 392 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 POLR2JP52435 117 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SHC2P98077 582 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 MAT1AQ00266 395 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 MC1RQ01726 317 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SRSF11Q05519 484 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 RCAN2Q14206 197 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 MAPRE2Q15555 327 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 AGKQ53H12 422 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ARHGAP40Q5TG30 622 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 C18orf63Q68DL7 685 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SLC48A1Q6P1K1 146 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 RIPOR1Q6ZS17 1223 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 NATD1Q8N6N6 113 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 OR8J2Q8NGG1 315 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 GFM2Q969S9 779 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 FKBP10Q96AY3 582 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TBC1D20Q96BZ9 403 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 COQ8BQ96D53 544 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SLC46A1Q96NT5 459 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TGIF2Q9GZN2 237 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 NRSN2Q9GZP1 204 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 RPF2Q9H7B2 306 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ATAD3AQ9NVI7 634 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 PCDHGA7Q9Y5G6 932 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 FER1L5A0AVI2 2057 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ALBP02768 609 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 COX7A2P14406 83 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 PRDX6P30041 224 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 XCR1P46094 333 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 KCNK10P57789 538 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 GABREP78334 506 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 COL9A2Q14055 689 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 MAP7Q14244 749 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SYT16Q17RD7 645 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 OR52E8Q6IFG1 317 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 C6orf89Q6UWU4 347 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 COX15Q7KZN9 410 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TREML1Q86YW5 311 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ZNF595Q8IYB9 648 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 RP9Q8TA86 221 aaKnown RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 DNAJB14Q8TBM8 379 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TANKQ92844 425 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 PPCDCQ96CD2 204 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 PEX11GQ96HA9 241 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 CSF3RQ99062 836 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SLC26A1Q9H2B4 701 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 SLC22A11Q9NSA0 550 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 TRPC4Q9UBN4 977 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 ZNF282Q9UDV7 671 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-204ENST00000372243 CES1P1Q9UKY3 287 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 PSME2Q9UL46 239 aa14.94□□□□□ -0.02
TMEM53-204ENST00000372243 CCT8L1PA6NM43 557 aa14.93□□□□□ -0.02
TMEM53-204ENST00000372243 DXOO77932 396 aaKnown RBP14.93□□□□□ -0.02
TMEM53-204ENST00000372243 FHP07954 510 aa14.93□□□□□ -0.02
TMEM53-204ENST00000372243 SNRPB2P08579 225 aaKnown RBP14.93□□□□□ -0.02
TMEM53-204ENST00000372243 CD82P27701 267 aa14.93□□□□□ -0.02
TMEM53-204ENST00000372243 ALDH9A1P49189 494 aa14.93□□□□□ -0.02
TMEM53-204ENST00000372243 ACTN3Q08043 901 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-204ENST00000372243 CAMK2BQ13554 666 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms