RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 HDDC3Q8N4P3 179 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 HORMAD2Q8N7B1 307 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 DRAXINQ8NBI3 349 aaPredicted RBP27.54■■■□□ 2
SSBP3-204ENST00000371320 OR9Q2Q8NGE9 314 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 SIGLEC11Q96RL6 698 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 RSPH9Q9H1X1 276 aaPredicted RBP27.54■■■□□ 2
SSBP3-204ENST00000371320 OSGEPL1Q9H4B0 414 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 LHX9Q9NQ69 397 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 SERGEFQ9UGK8 458 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 GPR89AB7ZAQ6 455 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 J3QRK9 145 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 PCDH17O14917 1159 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 NDUFS4O43181 175 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 SH3BP5O60239 455 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 GADD45GO95257 159 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 GPR89BP0CG08 455 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 ACP5P13686 325 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 IRF4Q15306 451 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 ADPRMQ3LIE5 342 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 Q6ZNX1 250 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 YAF2Q8IY57 180 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 LINC01555Q8NAE3 123 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 RHOXF1Q8NHV9 184 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 CHFRQ96EP1 664 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 C12orf66Q96MD2 445 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 COPS4Q9BT78 406 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 NEUROD4Q9HD90 331 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 C5AR2Q9P296 337 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 COL4A3Q01955 1670 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 PAK4O96013 591 aaPredicted RBP27.53■■■□□ 2
SSBP3-204ENST00000371320 IFNW1P05000 195 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 RHCEP18577 417 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 IDH2P48735 452 aaKnown RBP27.53■■■□□ 2
SSBP3-204ENST00000371320 HMGA2P52926 109 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 LSM3P62310 102 aaKnown RBP27.53■■■□□ 2
SSBP3-204ENST00000371320 HSPB3Q12988 150 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 GANABQ14697 944 aaKnown RBP27.53■■■□□ 2
SSBP3-204ENST00000371320 DUSP7Q16829 419 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 SPDYE7PQ495Y7 208 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 PHF10Q8WUB8 498 aaKnown RBP27.53■■■□□ 2
SSBP3-204ENST00000371320 SLC38A5Q8WUX1 472 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 PALMDQ9NP74 551 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 A4GALTQ9NPC4 353 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 HCN4Q9Y3Q4 1203 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 TRPM6Q9BX84 2022 aa27.53■■■□□ 2
SSBP3-204ENST00000371320 M0R3G1 203 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 BCHEP06276 602 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 TFPTP0C1Z6 253 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 LIMS1P48059 325 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 OCA2Q04671 838 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 ADCK2Q7Z695 626 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 ZNF605Q86T29 641 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 EXOSC8Q96B26 276 aaKnown RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 INSM2Q96T92 566 aaPredicted RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 PLCXD1Q9NUJ7 323 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 PSORS1C1Q9UIG5 152 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 PNMA8BQ9ULN7 279 aaPredicted RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 A0A1W2PP55 124 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 OR2A25A4D2G3 310 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 TMPRSS11DO60235 418 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 CCNB2O95067 398 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 TRIM23P36406 574 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 PCBP4P57723 403 aaKnown RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 KCNC4Q03721 635 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 AGERQ15109 404 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 RPS26P11Q5JNZ5 115 aaPredicted RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 C6orf120Q7Z4R8 191 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 UBE2Q1Q7Z7E8 422 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 SLCO6A1Q86UG4 719 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 NDNFQ8TB73 568 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 UTP15Q8TED0 518 aaKnown RBP27.52■■■□□ 2
SSBP3-204ENST00000371320 KLK6Q92876 244 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 PLA2G2FQ9BZM2 168 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 CORINQ9Y5Q5 1042 aa27.52■■■□□ 2
SSBP3-204ENST00000371320 ADH1BP00325 375 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 APODP05090 189 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 LCKP06239 509 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 C5AR1P21730 350 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 RANBP1P43487 201 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 ERVK-21P61565 698 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 CSNK1G2P78368 415 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 MLIPQ5VWP3 458 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 PLD3Q8IV08 490 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 SLC44A2Q8IWA5 706 aaPredicted RBP27.51■■□□□ 1.99
SSBP3-204ENST00000371320 DEPDC4Q8N2C3 294 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 PHPT1Q9NRX4 125 aaPredicted RBP27.51■■□□□ 1.99
SSBP3-204ENST00000371320 NUMA1Q14980 2115 aa27.51■■□□□ 1.99
SSBP3-204ENST00000371320 LCMT2O60294 686 aaKnown RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 FUCA1P04066 466 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 SERPIND1P05546 499 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 POU2F1P14859 743 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 ALDH4A1P30038 563 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 VBP1P61758 197 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 DMPKQ09013 629 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 FOXD4Q12950 439 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 MLF2Q15773 248 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-204ENST00000371320 UBE2UQ5VVX9 321 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 UBE3DQ7Z6J8 389 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 CCDC103Q8IW40 242 aa27.5■■□□□ 1.99
SSBP3-204ENST00000371320 MYDGFQ969H8 173 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms