RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PVRP15151 417 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 UGT2B7P16662 529 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 JAK1P23458 1154 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ATP5F1P24539 256 aaPredicted RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 GCGRP47871 477 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 EPS8Q12929 822 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 TOP3AQ13472 1001 aaPredicted RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 NCF4Q15080 339 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ZIC1Q15915 447 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 RBM48Q5RL73 367 aaKnown RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 TSTD2Q5T7W7 516 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 LCN8Q6JVE9 175 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 LRRC8EQ6NSJ5 796 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 RHBDD2Q6NTF9 364 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 KCNMB4Q86W47 210 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 SLC22A9Q8IVM8 553 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ZBTB2Q8N680 514 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 ELMO1Q92556 727 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 CLIP3Q96DZ5 547 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 VPS39Q96JC1 886 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ZNF347Q96SE7 839 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 NPAS2Q99743 824 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 MRPL57Q9BQC6 102 aaKnown RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 MRPL46Q9H2W6 279 aaKnown RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 HMG20AQ9NP66 347 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 RIC8BQ9NVN3 520 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 SNX7Q9UNH6 387 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ASF1AQ9Y294 204 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ACOT9Q9Y305 439 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 AP1M2Q9Y6Q5 423 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 SHANK1Q9Y566 2161 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ARGFXA6NJG6 315 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 E7ENX8 843 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 HCRTR1O43613 425 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 OR1I1O60431 355 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 OR56A5P0C7T3 313 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 CYP2A7P20853 494 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 GRIA1P42261 906 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 MLLT10P55197 1068 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 RAB39AQ14964 217 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 INAQ16352 499 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SLC5A12Q1EHB4 618 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 TRIM16LQ309B1 348 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 TBCELQ5QJ74 424 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ZNF787Q6DD87 383 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ANKRD26P1Q6NSI1 321 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ZNF773Q6PK81 442 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 MED25Q71SY5 747 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 CMC1Q7Z7K0 106 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SLC22A15Q8IZD6 547 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 PLD6Q8N2A8 252 aaKnown RBP14.18□□□□□ -0.14
LMO4-201ENST00000370542 DNAJC22Q8N4W6 341 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 HDAC10Q969S8 669 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SLCO4A1Q96BD0 722 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 RDH12Q96NR8 316 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SLC29A1Q99808 456 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 NEURL2Q9BR09 285 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 NOL11Q9H8H0 719 aaKnown RBP14.18□□□□□ -0.14
LMO4-201ENST00000370542 ACSS2Q9NR19 701 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 INIPQ9NRY2 104 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 TMEM45AQ9NWC5 275 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SPHK1Q9NYA1 384 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ACTR3BQ9P1U1 418 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 SLC2A6Q9UGQ3 507 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 ZDHHC2Q9UIJ5 367 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 PSME2Q9UL46 239 aa14.18□□□□□ -0.14
LMO4-201ENST00000370542 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
LMO4-201ENST00000370542 A0A0J9YY10 115 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 ZCWPW2A0A1B0GU75 182 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 MYOCOSA0A1B0GUC4 107 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 DHRS12A0PJE2 317 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 TARM1B6A8C7 271 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 CLPXO76031 633 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 ATE1O95260 518 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 ONECUT2O95948 504 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 GOT2P00505 430 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 CHRNGP07510 517 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 PEBP1P30086 187 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 CCR7P32248 378 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 PGDP52209 483 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 NAGLUP54802 743 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 CHAF1BQ13112 559 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 GRB7Q14451 532 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 USP10Q14694 798 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 KIR2DS3Q14952 304 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 HMBOX1Q6NT76 420 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 TMEM53Q6P2H8 277 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 DNAAF3Q8N9W5 541 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 OR4L1Q8NH43 312 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 PROKR1Q8TCW9 393 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 POP5Q969H6 163 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 SMAD5Q99717 465 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 CIB1Q99828 191 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 C17orf62Q9BQA9 187 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 MROQ9BYG7 248 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 KLHL25Q9H0H3 589 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 SEMA6AQ9H2E6 1030 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 LIN28AQ9H9Z2 209 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms