RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PMS2P1A4D2B8 440 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TBC1D3BA6NDS4 549 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF99A8MXY4 864 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 DLGAP3O95886 979 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 AHSGP02765 367 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ENO3P13929 434 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 KELP23276 732 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CCR10P46092 362 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ARHGDIAP52565 204 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ABCE1P61221 599 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SEMA5AQ13591 1074 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TOR1AIP1Q5JTV8 583 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 NXNL2Q5VZ03 156 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CCDC190Q86UF4 302 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 MINDY1Q8N5J2 469 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 EIF4E3Q8N5X7 224 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 EFCAB3Q8N7B9 438 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 KCTD4Q8WVF5 259 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 DEDD2Q8WXF8 326 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TMCO6Q96DC7 493 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SIPA1Q96FS4 1042 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ARL5BQ96KC2 179 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 OR2A14Q96R47 310 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PIP5K1AQ99755 562 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 BDH2Q9BUT1 245 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 NOL11Q9H8H0 719 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CASS4Q9NQ75 786 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 IL17CQ9P0M4 197 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PDZD2O15018 2839 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM8BA6NDV4 472 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 DBX1A6NMT0 343 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PRNPP04156 253 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 EPHX1P07099 455 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PROS1P07225 676 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 RBP1P09455 135 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CTPS1P17812 591 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 DGKAP23743 735 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SPAM1P38567 509 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 RFX2P48378 723 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF235Q14590 738 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PYCR3Q53H96 274 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CRB2Q5IJ48 1285 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ATXN7L2Q5T6C5 722 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 LAIR2Q6ISS4 152 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 JAZF1Q86VZ6 243 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CNTN4Q8IWV2 1026 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF548Q8NEK5 533 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 OR8K3Q8NH51 312 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 NDNFQ8TB73 568 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 MYDGFQ969H8 173 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 LRRC39Q96DD0 335 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SIGLEC11Q96RL6 698 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 IARS2Q9NSE4 1012 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TLK1Q9UKI8 766 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 FAM159BA6NKW6 160 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 HS6ST1O60243 411 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GMDSO60547 372 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 RAMP2O60895 175 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 C1QL1O75973 258 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 RHOCP08134 193 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 DDCP20711 480 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 HNRNPA2B1P22626 353 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF91Q05481 1191 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 DBPQ10586 325 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 FASTKD1Q53R41 847 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TEX30Q5JUR7 227 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TYW3Q6IPR3 259 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 UNC5DQ6UXZ4 953 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZCCHC23Q6ZST2 131 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 STRA8Q7Z7C7 330 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 CCDC103Q8IW40 242 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 NXNL1Q96CM4 212 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MFSD3Q96ES6 412 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 FBXL20Q96IG2 436 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 RADILQ96JH8 1075 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ABCG8Q9H221 673 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MFSD1Q9H3U5 465 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SYNPO2LQ9H987 977 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MCCC2Q9HCC0 563 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 CUEDC1Q9NWM3 386 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PTTG3PQ9NZH4 202 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SLC39A10Q9ULF5 831 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 LIPT1Q9Y234 373 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 A0A1W2PQM1 296 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SLC35F4A4IF30 521 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GPR89AB7ZAQ6 455 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 STX16O14662 325 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PLIN3O60664 434 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SCO1O75880 301 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 APOA1P02647 267 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GPIP06744 558 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GPR89BP0CG08 455 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 C6P13671 934 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PER3P56645 1201 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MVKQ03426 396 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PCDH1Q08174 1060 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF177Q13360 481 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms