RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ELOVL6Q9H5J4 265 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CCDC177Q9NQR7 707 aaPredicted RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 TM7SF3Q9NS93 570 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 AIG1Q9NVV5 245 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 WSB2Q9NYS7 404 aaPredicted RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 STOML1Q9UBI4 398 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 MOSPD1Q9UJG1 213 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 HEBP2Q9Y5Z4 205 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 TNRC6BQ9UPQ9 1833 aaKnown RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 LOC100653049A0A140TA62 436 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 KRT87PA6NCN2 255 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PRR19A6NJB7 356 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 MEI4A8MW99 385 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 NPIPB8E9PQR5 432 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 TRIM38O00635 465 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FFAR3O14843 346 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 GPR42O15529 346 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 KRT34O76011 436 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 RSL1D1O76021 490 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 PRKCAP17252 672 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 GPX3P22352 226 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PRPH2P23942 346 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 COL8A1P27658 744 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CPOXP36551 454 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 GNPDA1P46926 289 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 NUDT2P50583 147 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 THOP1P52888 689 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CLDN2P57739 230 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CSTF3Q12996 717 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 TARDBPQ13148 414 aaKnown RBP eCLIP8.36□□□□□ -1.07
TPM3-213ENST00000368545 PCM1Q15154 2024 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CPSF6Q16630 551 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■■□□□ 14.4
TPM3-213ENST00000368545 AGKQ53H12 422 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 XKR6Q5GH73 641 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FRG2Q64ET8 278 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FAAH2Q6GMR7 532 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 OR5AR1Q8NGP9 310 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 SELENOMQ8WWX9 145 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 REPS1Q96D71 796 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 TOE1Q96GM8 510 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 MRGPRX4Q96LA9 322 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 BMFQ96LC9 184 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FRG2BQ96QU4 278 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 HAUS8Q9BT25 410 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PCED1AQ9H1Q7 454 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CARS2Q9HA77 564 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 EFCAB1Q9HAE3 211 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FGF22Q9HCT0 170 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CCDC167Q9P0B6 97 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PSMD13Q9UNM6 376 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FAM171A2A8MVW0 826 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 E7ENX8 843 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 E7EQ34 232 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 H0YIV9 168 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 TNFSF14O43557 240 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 WFS1O76024 890 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PGM1P36871 562 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 SLC6A9P48067 706 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 TAP2Q03519 686 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 AP5B1Q2VPB7 878 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 MMEL1Q495T6 779 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 SCIMPQ6UWF3 145 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 LCTLQ6UWM7 567 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 ENPP7Q6UWV6 458 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 ABI3BPQ7Z7G0 1075 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 FAM9CQ8IZT9 166 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 SFRP1Q8N474 314 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 KYQ8NBH2 561 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PPFIBP2Q8ND30 876 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 HMGCLL1Q8TB92 370 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 HOXB13Q92826 284 aaPredicted RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 C12orf66Q96MD2 445 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 OR4K3Q96R72 315 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 EFCAB11Q9BUY7 163 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 MRPL1Q9BYD6 325 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 PCBD2Q9H0N5 130 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 C6orf106Q9H6K1 298 aaPredicted RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 MVB12BQ9H7P6 319 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 BRF2Q9HAW0 419 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 MRPL40Q9NQ50 206 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 C1orf109Q9NX04 203 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 ASIC5Q9NY37 505 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 ACSL6Q9UKU0 697 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 PRPF19Q9UMS4 504 aaKnown RBP8.36□□□□□ -1.07
TPM3-213ENST00000368545 KCNK6Q9Y257 313 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 TMED5Q9Y3A6 229 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 CCL27Q9Y4X3 112 aa8.36□□□□□ -1.07
TPM3-213ENST00000368545 MGRN1O60291 552 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DFNA5O60443 496 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PDYNP01213 254 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 IGHV4-34P06331 123 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 RAP1GDS1P52306 607 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SLC25A3Q00325 362 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ART3Q13508 389 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 RIPK1Q13546 671 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DOC2AQ14183 400 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CYP2A13Q16696 494 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms