RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
TPM3-211ENST00000368531 NOXRED1Q6NXP6 359 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 CCDC81Q6ZN84 652 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 RGS9BPQ6ZS82 235 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 CLNKQ7Z7G1 428 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 MMP21Q8N119 569 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 PPP3R2Q96LZ3 170 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 PTCHD1Q96NR3 888 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 OR1F2PQ96R84 312 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 C1orf50Q9BV19 199 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 VN1R1Q9GZP7 353 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 WDR55Q9H6Y2 383 aaPredicted RBP13.09□□□□□ -0.31
TPM3-211ENST00000368531 AKTIPQ9H8T0 292 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 CPNE5Q9HCH3 593 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 LANCL2Q9NS86 450 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 TEX10Q9NXF1 929 aaPredicted RBP13.09□□□□□ -0.31
TPM3-211ENST00000368531 VTI1BQ9UEU0 232 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
TPM3-211ENST00000368531 URB1O60287 2271 aaKnown RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TRPC5OSA6NMA1 111 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 CYR61O00622 381 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 CLDN4O14493 209 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 SDHDO14521 159 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 PROM1O43490 865 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 PRMT3O60678 531 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 LDB3O75112 727 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 AIFM1O95831 613 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 FURINP09958 794 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MAOAP21397 527 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 IL10P22301 178 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 PRPH2P23942 346 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 BUD31P41223 144 aaPredicted RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 HK2P52789 917 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 EFNA3P52797 238 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TAS2R50P59544 299 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TNFRSF17Q02223 184 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 ID2Q02363 134 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 SLC13A2Q13183 592 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 SSPNQ14714 243 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 KIAA0040Q15053 153 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 C6orf136Q5SQH8 315 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MAVSQ7Z434 540 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 FNDC5Q8NAU1 212 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TSLPQ969D9 159 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 CCT7Q99832 543 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MESP1Q9BRJ9 268 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 WDR41Q9HAD4 459 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MEAF6Q9HAF1 191 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 BAIAP2L1Q9UHR4 511 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.32
TPM3-211ENST00000368531 DLGAP4Q9Y2H0 992 aa13.08□□□□□ -0.32
TPM3-211ENST00000368531 NCOR2Q9Y618 2525 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 PGRMC2O15173 223 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
TPM3-211ENST00000368531 ALOX12BO75342 701 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 GUCY1B2O75343 617 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 RECKO95980 971 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 IL3P08700 152 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 NR2F6P10588 404 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 EPHA3P29320 983 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 MC1RQ01726 317 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 RHAGQ02094 409 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 EEF1A2Q05639 463 aaKnown RBP13.07□□□□□ -0.32
TPM3-211ENST00000368531 C2orf80Q0P641 193 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 NSDHLQ15738 373 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 SLC9B1Q4ZJI4 515 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 NDUFAF5Q5TEU4 345 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 IL23RQ5VWK5 629 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 LANCL3Q6ZV70 420 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 CLHC1Q8NHS4 586 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 ADAMTS18Q8TE60 1221 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 GFM2Q969S9 779 aaKnown RBP13.07□□□□□ -0.32
TPM3-211ENST00000368531 C8orf44Q96CB5 159 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
TPM3-211ENST00000368531 EGLN2Q96KS0 407 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 TSSK3Q96PN8 268 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 NECTIN3Q9NQS3 549 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 PRDM9Q9NQV7 894 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 SEMA3GQ9NS98 782 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 FGFR1OP2Q9NVK5 253 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
TPM3-211ENST00000368531 A0A087WV48 116 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms