RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 RAP1GDS1P52306 607 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 HNRNPFP52597 415 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 PRKAA2P54646 552 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SLC18A2Q05940 514 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 IFT88Q13099 833 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 TRAF3Q13114 568 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SLC13A2Q13183 592 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SLAMF1Q13291 335 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 TLR1Q15399 786 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 CCDC153Q494R4 210 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 GGTA1PQ4G0N0 100 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 UNC50Q53HI1 259 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 FRG2Q64ET8 278 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 B3GNTL1Q67FW5 361 aaPredicted RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 RPS27LQ71UM5 84 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 SCUBE1Q8IWY4 988 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 IQCKQ8N0W5 287 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 ZCCHC7Q8N3Z6 543 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 TMEM52Q8NDY8 209 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 CATSPER1Q8NEC5 780 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 NFAM1Q8NET5 270 aaPredicted RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 CPT1CQ8TCG5 803 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 TRPC4APQ8TEL6 797 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 AENQ8WTP8 325 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 CAVIN3Q969G5 261 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 MIB2Q96AX9 1013 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SNRNP40Q96DI7 357 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 FRG2BQ96QU4 278 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SERPINI1Q99574 410 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 PARD6BQ9BYG5 372 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 ILKAPQ9H0C8 392 aaPredicted RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 AHSPQ9NZD4 102 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 FBXW2Q9UKT8 454 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 COPG1Q9Y678 874 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 GCN1Q92616 2671 aaKnown RBP9.23□□□□□ -0.93
CD48-202ENST00000368046 MED13Q9UHV7 2174 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 BSNQ9UPA5 3926 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 A0A1B0GTL3 188 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 SAGE2PA6NJ88 616 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 A8MUA0 341 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 G3V2L1 256 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 PYCARD-AS1I3L0S3 204 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 PLPP1O14494 284 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 COPEO14579 308 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 VPS4BO75351 444 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 OR4F21O95013 312 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ETHE1O95571 254 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 MLYCDO95822 493 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 WDPCPO95876 746 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 KRT4P19013 534 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 CPN2P22792 545 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 TLX1P31314 330 aaPredicted RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 BSGP35613 385 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 NAA20P61599 178 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ARG2P78540 354 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 IFFO1Q0D2I5 559 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 STX4Q12846 297 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 SERTAD2Q14140 314 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ZNF169Q14929 603 aaPredicted RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 TERF2Q15554 542 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 MEP1AQ16819 746 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ACER2Q5QJU3 275 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 MRM1Q6IN84 353 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 RPUSD3Q6P087 351 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 CUZD1Q86UP6 607 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 GPR180Q86V85 440 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ATCAYQ86WG3 371 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 RIBC1Q8N443 379 aaPredicted RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 CISD2Q8N5K1 135 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 SLC5A8Q8N695 610 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 FAM47BQ8NA70 645 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 OR1N1Q8NGS0 311 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 OR2W6PQ8NHA6 318 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 TANKQ92844 425 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 L3HYPDHQ96EM0 354 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 SORBS1Q9BX66 1292 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 ALOXE3Q9BYJ1 711 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ELOVL6Q9H5J4 265 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 DDX31Q9H8H2 851 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 PNO1Q9NRX1 252 aaKnown RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 NMRK1Q9NWW6 199 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 LUZP4Q9P127 313 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 VTI1BQ9UEU0 232 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.22□□□□□ -0.93
CD48-202ENST00000368046 TRPS1Q9UHF7 1281 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 PHF11Q9UIL8 331 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 ZNF225Q9UK10 706 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 EMCNQ9ULC0 261 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 VPS4AQ9UN37 437 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 SNX6Q9UNH7 406 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 PLAAQ9Y263 795 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 CLDN16Q9Y5I7 305 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 CSAG2Q9Y5P2 127 aa9.22□□□□□ -0.93
CD48-202ENST00000368046 V9GYY5 206 aaPredicted RBP9.22□□□□□ -0.93
CD48-202ENST00000368046 SPTA1P02549 2419 aa9.21□□□□□ -0.93
CD48-202ENST00000368046 SCN3AQ9NY46 2000 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms