RNA–Protein interactions for RNA: ENST00000366733.5

MRPL55-207, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-207ENST00000366733 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-207ENST00000366733 ZBTB18Q99592 522 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 CTRCQ99895 268 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 ZNF304Q9HCX3 659 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-207ENST00000366733 SLC22A11Q9NSA0 550 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 PISDQ9UG56 409 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
MRPL55-207ENST00000366733 SATB2Q9UPW6 733 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 B3GALT1Q9Y5Z6 326 aa12.49□□□□□ -0.41
MRPL55-207ENST00000366733 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 GABRR3A8MPY1 467 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 MEN1O00255 615 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ALBP02768 609 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 IL6P05231 212 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 CYC1P08574 325 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 PIM1P11309 404 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ZNF28P17035 718 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 FBLP22087 321 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ALAS2P22557 587 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 TLX1P31314 330 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 FRKP42685 505 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 POLR2JP52435 117 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 DCDP81605 110 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 C2orf80Q0P641 193 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 CEBPEQ15744 281 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 NKAIN1Q4KMZ8 207 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 AGKQ53H12 422 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 TMEM164Q5U3C3 297 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 OR52E8Q6IFG1 317 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ZNF595Q8IYB9 648 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 NATD1Q8N6N6 113 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 RP9Q8TA86 221 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 TANKQ92844 425 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 CLIP3Q96DZ5 547 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 FAM122AQ96E09 287 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 PRPF18Q99633 342 aaKnown RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ULBP3Q9BZM4 244 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 BHLHE41Q9C0J9 482 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-207ENST00000366733 LANCL2Q9NS86 450 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 HCN3Q9P1Z3 774 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 FBXW2Q9UKT8 454 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
MRPL55-207ENST00000366733 DCDC2BA2VCK2 349 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 SCN2BO60939 215 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 STK17BO94768 372 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 NTRK1P04629 796 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 PGRP06401 933 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 FHP07954 510 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CPN2P22792 545 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CD82P27701 267 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 KIR3DL1P43629 444 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 OR1D4P47884 311 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 MAPK10P53779 464 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 NME5P56597 212 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 OLR1P78380 273 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 IGLV3-21P80748 117 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 SHC2P98077 582 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 MC1RQ01726 317 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 LRRC74AQ0VAA2 488 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CPTPQ5TA50 214 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 ARHGAP40Q5TG30 622 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 C1orf189Q5VU69 101 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 C18orf63Q68DL7 685 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 SAMD14Q8IZD0 417 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 MMP21Q8N119 569 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 FAM47BQ8NA70 645 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 C7orf57Q8NEG2 295 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 OR51Q1Q8NH59 317 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 DNAJB14Q8TBM8 379 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 PPCDCQ96CD2 204 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CMTM5Q96DZ9 223 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 SLC46A1Q96NT5 459 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CSF3RQ99062 836 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 SLC25A23Q9BV35 468 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 NRSN2Q9GZP1 204 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 RPF2Q9H7B2 306 aaKnown RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 WDR54Q9H977 334 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 WDR41Q9HAD4 459 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 ATAD3AQ9NVI7 634 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 C14orf105Q9NVL8 296 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 FAM120CQ9NX05 1096 aaKnown RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 CCDC167Q9P0B6 97 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 NDOR1Q9UHB4 597 aa12.47□□□□□ -0.41
MRPL55-207ENST00000366733 MRPS33Q9Y291 106 aaKnown RBP12.47□□□□□ -0.41
MRPL55-207ENST00000366733 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms