RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CCSMST1Q4G0I0 132 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 SLC35F1Q5T1Q4 408 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 TRIM46Q7Z4K8 759 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 ABI3BPQ7Z7G0 1075 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 SLC37A3Q8NCC5 494 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 EPYCQ99645 322 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 C2orf49Q9BVC5 232 aaPredicted RBP18.79■□□□□ 0.6
TRIM58-201ENST00000366481 SLC32A1Q9H598 525 aa18.79■□□□□ 0.6
TRIM58-201ENST00000366481 ACPPP15309 386 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PBLDP30039 288 aaPredicted RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 MAB21L1Q13394 359 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 LARS2Q15031 903 aaKnown RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PLAG1Q6DJT9 500 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 GABARAPL3Q9BY60 117 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 CWH43Q9H720 699 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 GLTPQ9NZD2 209 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF222Q9UK12 451 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HIST1H2AGP0C0S8 130 aaPredicted RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PRPS2P11908 318 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 POLR2CP19387 275 aaPredicted RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HIST1H2ADP20671 130 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 MAPK1P28482 360 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 TARDBPQ13148 414 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 FAM124AQ86V42 546 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF366Q8N895 744 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HJURPQ8NCD3 748 aaPredicted RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HIST1H2AHQ96KK5 128 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 FAM129BQ96TA1 746 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HIST1H2AJQ99878 128 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 H2AFJQ9BTM1 129 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 HCN4Q9Y3Q4 1203 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 KNL1Q8NG31 2342 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 LEUTXA8MZ59 168 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 SAP18O00422 153 aaKnown RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PRKAR1AP10644 381 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 GABRR2P28476 465 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 ASAH1Q13510 395 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 DEFB115Q30KQ5 88 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 TTLL9Q3SXZ7 439 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 FLYWCH1Q4VC44 716 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PLEKHM3Q6ZWE6 761 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 ATCAYQ86WG3 371 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 PTOV1Q86YD1 416 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 CHST14Q8NCH0 376 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 USP7Q93009 1102 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 TMEM121BQ9BXQ6 578 aaPredicted RBP18.78■□□□□ 0.6
TRIM58-201ENST00000366481 GALNT9Q9HCQ5 603 aa18.78■□□□□ 0.6
TRIM58-201ENST00000366481 GBF1Q92538 1859 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 LOC102723532A0A0G2JNH3 316 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 ZNF821O75541 412 aaPredicted RBP18.77■□□□□ 0.6
TRIM58-201ENST00000366481 APOL3O95236 402 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 PDGFAP04085 211 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 LAMP1P11279 417 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 PTPN6P29350 595 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 AP1S1P61966 158 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 PTSQ03393 145 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 UAP1L1Q3KQV9 507 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 TYW3Q6IPR3 259 aaKnown RBP18.77■□□□□ 0.6
TRIM58-201ENST00000366481 USP30Q70CQ3 517 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 Q8N402 240 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 AQP11Q8NBQ7 271 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 OPALINQ96PE5 141 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 DOHHQ9BU89 302 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 NTMT1Q9BV86 223 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 HMX1Q9NP08 348 aaPredicted RBP18.77■□□□□ 0.6
TRIM58-201ENST00000366481 TMCC3Q9ULS5 477 aa18.77■□□□□ 0.6
TRIM58-201ENST00000366481 M6PRP20645 277 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 CST5P28325 142 aaPredicted RBP18.77■□□□□ 0.59
TRIM58-201ENST00000366481 PREPP48147 710 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 NOXRED1Q6NXP6 359 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 XKRXQ6PP77 449 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 SORCS1Q8WY21 1168 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 HDHD2Q9H0R4 259 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 HHATLQ9HCP6 504 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 CREBZFQ9NS37 354 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 SRRDQ9UH36 339 aa18.77■□□□□ 0.59
TRIM58-201ENST00000366481 PLXNA4Q9HCM2 1894 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 PCDH17O14917 1159 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 ENTPD6O75354 484 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 POU4F3Q15319 338 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 CDKN3Q16667 212 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 Q6ZVU0 165 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 BCDIN3DQ7Z5W3 292 aaKnown RBP18.76■□□□□ 0.59
TRIM58-201ENST00000366481 TMC8Q8IU68 726 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 DCAF4L2Q8NA75 395 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 SEC14L4Q9UDX3 406 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 TRPS1Q9UHF7 1281 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 NDRG2Q9UN36 371 aaKnown RBP18.76■□□□□ 0.59
TRIM58-201ENST00000366481 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 A0A0C4DFX4 3053 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 CIB4A0PJX0 185 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 WASHC1A8K0Z3 465 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 PDPK1O15530 556 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 SERPINI2O75830 405 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 TNNI3P19429 210 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 CD9P21926 228 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 PSMA3P25788 255 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 KCNJ10P78508 379 aa18.76■□□□□ 0.59
TRIM58-201ENST00000366481 IRF8Q02556 426 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms