RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 LRRC46Q96FV0 321 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 WFIKKN1Q96NZ8 548 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 PPP1R2P1Q96PQ5 205 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 FERMT1Q9BQL6 677 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 BPIFA3Q9BQP9 254 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 RBM24Q9BX46 236 aaKnown RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 OSBPL8Q9BZF1 889 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 ACKR4Q9NPB9 350 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 YAE1D1Q9NRH1 226 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 FAM114A2Q9NRY5 505 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 TREX1Q9NSU2 369 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 SACM1LQ9NTJ5 587 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNF701Q9NV72 531 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 ADAMTS6Q9UKP5 1117 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 AHRRA9YTQ3 701 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 OIP5O43482 229 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 NDUFS3O75489 264 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SIX3O95343 332 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SERPINC1P01008 464 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 CATP04040 527 aaKnown RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SMIM10L1P0DMW3 83 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 RNH1P13489 461 aaKnown RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PAX1P15863 534 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 NPPBP16860 134 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 NMBRP28336 390 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PTPN7P35236 360 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 DUSP8Q13202 625 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 RUNX2Q13950 521 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SIX1Q15475 284 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF791Q3KP31 576 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 AARS2Q5JTZ9 985 aaKnown RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 MEI1Q5TIA1 1274 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PRAMEF20Q5VT98 475 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 KIAA0930Q6ICG6 404 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 CES3Q6UWW8 571 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PIWIL4Q7Z3Z4 852 aaKnown RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 LRRC6Q86X45 466 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PRELID2Q8N945 189 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PTPMT1Q8WUK0 201 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 ALG3Q92685 438 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PIK3IP1Q96FE7 263 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SMIM10Q96HG1 83 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 TRIB1Q96RU8 372 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 DNAJC7Q99615 494 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 PRDM14Q9GZV8 571 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 KLHL28Q9NXS3 571 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 CRYL1Q9Y2S2 319 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC6A5Q9Y345 797 aa7.77□□□□□ -1.17
HMGB1P39-201ENST00000366304 CR1P17927 2039 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 C15orf38-AP3S2A0A0A6YYH1 394 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CD8B2A6NJW9 211 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF839A8K0R7 811 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR1F1O43749 312 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CD5LO43866 347 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 AKR1B10O60218 316 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 IL18BPO95998 194 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 P04436 131 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 SERPIND1P05546 499 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC35G6P0C7Q6 338 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 FAM157BP0CG42 384 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CHRM3P20309 590 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 HRH2P25021 359 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCKARP32238 428 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 OPRM1P35372 400 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 PPARGP37231 505 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 TERF1P54274 439 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 HADHBP55084 474 aaKnown RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 FAM27E3Q08E93 113 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 PWP1Q13610 501 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 KCTD19Q17RG1 926 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 VASNQ6EMK4 673 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF549Q6P9A3 640 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CENPUQ71F23 418 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CLNKQ7Z7G1 428 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 LINC00523Q86TU6 105 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ANKRD53Q8N9V6 530 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR4K1Q8NGD4 311 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 NT5CQ8TCD5 201 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ANKRD9Q96BM1 317 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 WDYHV1Q96HA8 205 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 SGCZQ96LD1 299 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR4K3Q96R72 315 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 SGPP1Q9BX95 441 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 REG4Q9BYZ8 158 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 PHACTR1Q9C0D0 580 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 NHEJ1Q9H9Q4 299 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCDC177Q9NQR7 707 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 EIF3LQ9Y262 564 aaKnown RBP7.76□□□□□ -1.17
HMGB1P39-201ENST00000366304 A0A0G2JN53 185 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 A8MXE2 369 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CES2O00748 559 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 VAPBO95292 243 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ACSL3O95573 720 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms