RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CAPN3P20807 821 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 CXCR2P25025 360 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 PIK3CBP42338 1070 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 PPM1FP49593 454 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 MTTPP55157 894 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 NME5P56597 212 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 PHEXP78562 749 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 FOXM1Q08050 763 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 TSTA3Q13630 321 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SLBPQ14493 270 aaKnown RBP eCLIP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 C6orf163Q5TEZ5 329 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 PRMT9Q6P2P2 845 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 C6orf15Q6UXA7 325 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 BNC2Q6ZN30 1099 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 KRT78Q8N1N4 520 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 FBXW8Q8N3Y1 598 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 Q8NA96 180 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 LINC01555Q8NAE3 123 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 OR4K1Q8NGD4 311 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 OR52E1Q8NGJ3 308 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 OR10G6Q8NH81 332 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 HUS1BQ8NHY5 278 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 ZFPM2Q8WW38 1151 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SH3KBP1Q96B97 665 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 TEX37Q96LM6 180 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 ZBTB18Q99592 522 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 HOPXQ9BPY8 73 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 ACTL8Q9H568 366 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SLAMF7Q9NQ25 335 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 GID8Q9NWU2 228 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SIRT5Q9NXA8 310 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 LUZP4Q9P127 313 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 LEF1Q9UJU2 399 aaPredicted RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SH2B3Q9UQQ2 575 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 ENTPD4Q9Y227 616 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 RUVBL1Q9Y265 456 aaKnown RBP10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 SPG11Q96JI7 2443 aa10.68□□□□□ -0.7
CSNK1E-202ENST00000366216 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 TRBV23OR9-2A0A075B6M9 112 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CCDC154A6NI56 674 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 OR52A4PA6NMU1 304 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CFLARO15519 480 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 PRICKLE3O43900 615 aaPredicted RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 RECKO95980 971 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CDH1P12830 882 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 F3P13726 295 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 IL12AP29459 219 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 SERPINB1P30740 379 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 SHMT2P34897 504 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 ACTR1BP42025 376 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CLNS1AP54105 237 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CLDN8P56748 225 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 ACTR1AP61163 376 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 PSME3P61289 254 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 ABATP80404 500 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 PRDX1Q06830 199 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 TLR1Q15399 786 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 VPS26BQ4G0F5 336 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 PIGGQ5H8A4 983 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 MCEMP1Q8IX19 187 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 LIX1Q8N485 282 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 DPP10Q8N608 796 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 GALNT6Q8NCL4 622 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 C11orf24Q96F05 449 aaPredicted RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 APIPQ96GX9 242 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 CDRT15Q96T59 188 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 AIF1LQ9BQI0 150 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 GPATCH1Q9BRR8 931 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 DPY30Q9C005 99 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 RHBGQ9H310 441 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 SIDT1Q9NXL6 827 aaKnown RBP10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 OR6C2Q9NZP2 312 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 TAC3Q9UHF0 121 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 ICKQ9UPZ9 632 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 PCDHGA6Q9Y5G7 932 aa10.67□□□□□ -0.7
CSNK1E-202ENST00000366216 DNHD1Q96M86 4753 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 OR5K4A6NMS3 321 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 MAGEB17A8MXT2 336 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 PRMT3O60678 531 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 MYO1DO94832 1006 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 CCNDBP1O95273 360 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 IL6P05231 212 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 PCNAP12004 261 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 HRH2P25021 359 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 SLC19A1P41440 591 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 FASLGP48023 281 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 CCR8P51685 355 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 C21orf58P58505 322 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 ACTR3P61158 418 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 RPS13P62277 151 aaKnown RBP10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 REEP5Q00765 189 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 KPNB1Q14974 876 aaKnown RBP10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 SNCBQ16143 134 aa10.66□□□□□ -0.7
CSNK1E-202ENST00000366216 SPATS1Q496A3 300 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms